Dietzia kunjamensis: NHB83_08315
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Entry
NHB83_08315 CDS
T08346
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dkn
Dietzia kunjamensis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dkn03016
]
NHB83_08315
Enzymes [BR:
dkn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NHB83_08315
Transfer RNA biogenesis [BR:
dkn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NHB83_08315
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
USX47403
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Position
1785431..1786669
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AA seq
412 aa
AA seq
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MSGRRRGETPPGAQPPPAEYEFVDALPAIEAVADALRSSPGPVAVDVERASGIRYADRAF
LLQLRAPTGPALLVDPETPGRAIGSLADILSTRPLLLHAASQDLPSMRELGVSPTSLVDT
ELAGRFLGTERVNLGAMISEHLGIGLAKAHSAADWSRRPLPAAWLDYAAYDVLFLHELAD
EVLPRLDELGRREWFEAECRYLVESGPAPAAPDPWRRLSRLSSLRDGRQLARARELWMAR
DRVAAERDIAPKRLLGDAAIVEAARVGPTNRTALLAIEGFDGPHRRRLVGEWLAALEWAD
GLGRADLPSRQGPPAEHPPHASWKRNEPEAAELLEIARERIGALADDLGLEPGLLLKPST
LRLWVWRAATTRSGDDAELLHDVLLTESARAWQIELATDPLLEAVRSFRADS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcgccgccgcggcgagaccccgcccggggcacagccacccccggccgagtac
gagttcgtcgacgccctccccgccatcgaggcggtcgccgacgccctgcggtcctcgccc
ggccccgtcgcggtcgacgtcgaacgcgcttcggggatccggtatgccgaccgggccttc
ctcctgcaactccgcgcccccaccggccccgccctgctcgtggacccggagaccccgggt
cgggccatcggctccctcgccgacatcctgtcgacccgccccctgctgctccacgccgcg
agtcaggacctcccgtcgatgcgtgagctgggagtctcgccgacctcgctcgtcgacacc
gagctggccggacgtttcctcggcaccgagcgggtcaacctcggggcgatgatctcggag
cacctcgggatcggcctggccaaggcgcactccgccgccgactggtctcgtcgcccgttg
ccggcggcgtggttggactacgcagcctatgacgtgctgttcctgcacgaactggcggac
gaggtcctgccgcggctcgacgagctcggccgccgtgagtggttcgaggcggagtgtcgg
tacctggtggagtccggcccggcacctgccgcgccggacccctggcgtcgactgtcccgg
ctgtcgagcctgcgcgacggccggcaactggcgcgcgccagggagttgtggatggcccgg
gaccgggtcgcggccgagcgggacatcgcccccaagcggctcctcggtgacgcggcgatc
gtggaggccgccagggtggggccgacgaacagaaccgcactgctggcgatcgaggggttc
gacggacctcaccgccgacggctcgtcggggaatggctcgccgccctcgagtgggccgac
gggctggggcgggccgacctgccctcccggcaggggccgcccgccgagcacccgccgcac
gcgtcgtggaagcgaaacgagcccgaggccgcggagttgctcgagatcgcccgcgaacgg
atcggcgcactcgccgacgacctgggtctggagcccggactcctgctcaaaccctcgacg
ctgagactgtgggtgtggcgcgcggcgacgacccggtccggggacgacgcggaactgctc
cacgacgtcctgctcaccgagagcgcccgtgcctggcagatcgaactggccaccgacccc
ctgctcgaggcggtgcggagcttccgcgcggattcctga
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