Dietzia kunjamensis: NHB83_08520
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Entry
NHB83_08520 CDS
T08346
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dkn
Dietzia kunjamensis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dkn03016
]
NHB83_08520 (truB)
Enzymes [BR:
dkn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NHB83_08520 (truB)
Transfer RNA biogenesis [BR:
dkn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NHB83_08520 (truB)
Prokaryotic type
NHB83_08520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
USX47438
LinkDB
All DBs
Position
complement(1831271..1832182)
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AA seq
303 aa
AA seq
DB search
MTPRRPDPRPAPDPGLVVVDKPGGMSSHDVVGRLRRYFGTRKVGHAGTLDPMATGVLVVG
IERATKMLGLLALETKSYEATIRLGQTTTTDDAEGETTSTTDASAVTDEAIDAAVAALTG
EIDQVPSAVSAIKVDGRRAYDRVRAGEEVELRPRRVTVSRFDVLERTRSGAVVDLVVVVD
CSTGTYIRALARDLGSALGVGGHLTALRRTHVGPFGLDVARTLDQLETDPTLSLDLDAAA
LTAFPRRDIDADEAEGLRHGRWLEARGDAGVVAAVGPDGRVAALVSESGRRAAPVVVMRP
AGL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgcgcagacccgacccccgccccgctcccgaccccggcctggtggtcgtcgac
aagccggggggcatgagtagccacgacgtcgtcggacggctccggcgctacttcggcacc
cgcaaggtcggccacgccggaacgctcgacccgatggccaccggggtgctcgtggtgggc
atcgaacgcgccaccaagatgctcggactgctggcactggagaccaagtcctacgaggcc
accatccgtctcggccagaccacgaccaccgacgacgccgagggggagaccacctcgacc
accgacgcctccgccgtgaccgacgaggcgatcgacgcggccgtcgcagccctgaccggg
gagatcgaccaggtcccgtccgcggtgagcgcgatcaaggtggacgggaggcgggcctac
gaccgcgtgcgggcgggggaggaggtcgagctccggccacggcgggtcaccgtctcccgg
ttcgacgtgctcgagcggacccgctccggggcggtggtcgacctcgtcgtcgtcgtcgac
tgctccaccggaacctacatccgcgcgctcgcccgggacctcggctccgccctcggggtc
ggcggtcacctcacggcgctgcgccgcacccacgtcgggccgttcggtctcgacgtggca
cggaccctcgaccagctggagaccgatccgacactgtcgctggacctcgacgccgccgca
ctgaccgcgttcccccgacgcgacatcgacgccgacgaggcggagggactgcgccacggc
cgatggctcgaggcccgcggtgacgccggggtcgtcgccgccgtcgggccggacggccgg
gtcgcggcgctggtctcggaatcggggcggcgtgccgctccggtcgtggtcatgcgcccg
gcgggcctgtga
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