Dietzia kunjamensis: NHB83_08975
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Entry
NHB83_08975 CDS
T08346
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn03030
DNA replication
dkn03430
Mismatch repair
dkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHB83_08975
03430 Mismatch repair
NHB83_08975
03440 Homologous recombination
NHB83_08975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dkn03032
]
NHB83_08975
03400 DNA repair and recombination proteins [BR:
dkn03400
]
NHB83_08975
Enzymes [BR:
dkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHB83_08975
DNA replication proteins [BR:
dkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHB83_08975
DNA repair and recombination proteins [BR:
dkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHB83_08975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
USX44444
LinkDB
All DBs
Position
complement(1922426..1923148)
Genome browser
AA seq
240 aa
AA seq
DB search
MVLPRLTAAGRRRSAARRAPDGPLRRFLETPPPDPTTPLEDLSLLAVDVETTGLDPRHDR
VLAVGFVPVDGDRIVLGGAGSVLLRPDHGPDDDDDGVGQSATVHGLTDDTMATGEDVEDV
LDRVFTALTGRVLVAHYCPIEVDFLRALCRRTFGIRPPLESVDTLELHRRVLGGGVDMGF
TADPSPERLRLWGARERYGLPQYRAHDPLVDALACAELYLAQVTELRDRGARTLRDLRTA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgccacggctgaccgcggccggccgccggaggagtgccgcccgccgggccccc
gacgggccactgcggcgatttctggagacaccgccgccggatccgaccactccgctcgag
gacctgtccctcctcgcggtggacgtcgagaccaccgggctcgatccccggcacgaccgg
gtcctggcggtggggttcgtccccgtcgacggggaccgaatcgtcctgggcggagcggga
tcggtgctgctgcgtcccgatcacggtccggacgacgacgacgacggggtggggcagagt
gccaccgtgcacggactcacggacgacacgatggccaccggggaggatgtcgaggacgtc
ctggaccgggtgttcacggctctgaccgggcgggtgttggtcgcgcactactgcccgata
gaggtcgacttcctgcgagcgttgtgtcggcgcacgttcggcatccggccaccactggag
tccgtcgacaccctggaactgcaccggcgggtcctgggcgggggcgtcgacatgggcttc
accgccgacccgtcgcccgagaggctgcggctctggggtgcccgcgagaggtacgggttg
ccgcagtaccgcgcacacgacccgctggtcgacgccctcgcctgcgccgagctgtacctc
gcacaggtcaccgagctccgcgaccgtggggcgcggacgctgcgggacctgcggaccgcc
tag
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