Dietzia kunjamensis: NHB83_11400
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Entry
NHB83_11400 CDS
T08346
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dkn
Dietzia kunjamensis
Pathway
dkn03420
Nucleotide excision repair
dkn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHB83_11400
03430 Mismatch repair
NHB83_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dkn03400
]
NHB83_11400
Enzymes [BR:
dkn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHB83_11400
DNA repair and recombination proteins [BR:
dkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHB83_11400
MMR (mismatch excision repair)
Other MMR factors
NHB83_11400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USX44864
LinkDB
All DBs
Position
complement(2439742..2442237)
Genome browser
AA seq
831 aa
AA seq
DB search
MTDTAHASARPTTPHSPLLDGLNPQQAAAVTHRGGPLLIVAGAGSGKTSVLTRRIAYLLA
EGGAHPGQILAITFTNKAAAEMRERVATLVGPHAERMWVATFHSICVRILRAQSALLGTR
NSNFTIYDSDDSRRLLGMIAKEQQLEVKKFTPRMLATAISNHKNELREPSEAMDRAMEDS
DRTGQTVAAVYTEYQSRLQAANAFDFDDLIGETVALLRAHPEVSAYYRRRFRHVMVDEYQ
DTNHAQYVLVRTLVGGAAGNDDEVGVPPAELCVVGDADQSIYAFRGATIRNIEDFEHDYP
DARSILLEQNYRSTQTILTAANAVISRNPGRREKNLWTSEGAGELLVGYVADNEHDEARF
IAGEIDRLVDSGEASYSDMAVFYRTNNSSRVVEDVFVRLGLPYKVVGGTRFYERKEVRDI
VAYLKVLGNPDDTVALRRILNTPRRGIGDRAEACVVVHAEQRGIGFGRALRDAAEGKVSL
LPTRSVKAIAGFVQMLDDLRGRLDGSGHAAGEDSAPDVGALVEAVLESTGYRAELEASND
PQDAARLDNLNELVGVGREFSSEAALQRSAREQGFGIEDAGDAAGAVPDQADAQLDEGLA
EPGSLAAFLERVSLVADADQIPDEDQGQVTLMTLHTAKGLEFPVVFLIGMEDGLFPHMRA
LGDPAELSEERRLAYVGITRARKRLYLTRAMMRSSWGQPMTNPGSRFLEEIPTEAIEWQR
EEPAGGGGFGDDDSYVPRRRFGGGSGGYGSGGYGSGGAGSASRRSSGIPRAKASAPALEL
APGDRVTHDKYGLGKVLSCDGSGPRATATIDFGASGKVRLMLIGGVPMQKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgcacacgcttccgcccgaccgaccacgccccactcgccccttctggac
gggctcaacccacagcaggccgccgcggtcacacaccgcggcggcccgttgttgatcgtg
gccggcgcgggctcgggcaagaccagcgtgctcacgcggcggatcgcgtacctgctggcc
gagggtggcgcgcacccggggcagatcctggccatcacgttcaccaacaaggcggccgcc
gagatgcgcgagagggtcgccacactggtcggcccgcacgccgagcggatgtgggtggcg
acgttccactcgatctgtgtgcggatcctccgcgcccagtccgcgctgctcgggacgcgg
aactcgaacttcacgatctacgactcggacgactcccggcggctgctggggatgatcgcc
aaggagcagcagctcgaggtcaagaagttcaccccccggatgctggccacggccatctcc
aaccacaagaacgagttgcgcgagccgtccgaggcgatggaccgggcgatggaggactcc
gaccgcaccgggcagaccgtcgcggccgtctacacggagtaccagtcgaggttgcaggcg
gccaacgccttcgatttcgacgatctgatcggggagacggtcgcgctgctgcgtgcccac
cccgaggtctcggcgtactaccggcggcggttccgtcacgtcatggtggacgagtaccag
gacaccaaccacgcccagtacgtcctggtgcgcacgctcgtcggcggggcggccgggaac
gacgacgaggtgggcgtccccccggccgaactctgcgttgtcggtgacgccgaccagtcg
atctacgcgttccgcggggccacgatcaggaacatcgaggacttcgagcacgactacccc
gatgcacgttccatcctgttggagcagaactaccgttccacgcagacgatcctcacggcc
gccaacgccgtgatctcgcgcaacccgggccgccgggagaagaacctgtggacctccgag
ggtgcgggtgagctgctggtcggctacgtggcggacaacgagcacgacgaggcgaggttc
atcgccggggagatcgacaggttggtcgactcgggtgaggcctcctactccgacatggcc
gtgttctaccggaccaacaactcctcccgcgtggtcgaggacgtgttcgtccgactgggc
ctgccctacaaggtcgtgggcggcacccggttctacgagcgcaaggaggtgcgcgacatc
gtcgcctacctaaaggtgctgggtaacccggacgacaccgtggcgctgcgccggatcctc
aacaccccccgacgagggatcggggatcgtgccgaggcgtgcgtggtggtccacgccgag
cagcgggggatcgggttcggccgcgcgttgcgggacgcggctgagggaaaggtgtcgctg
ctgccgacgaggtcggtcaaggcgatcgccgggttcgtgcagatgctcgacgacctgcgg
gggcggctggacggcagcggtcacgccgccggggaggactcggcgcccgatgtcggggca
ctggtggaggccgtgctggagagcaccggctaccgcgccgagctggaggcgtccaacgat
ccgcaggacgccgcccgcctggacaacctcaacgagctcgtcggcgtgggccgggagttc
tcctcggaggccgcactgcaacgttccgcgcgggaacagggcttcgggatcgaggacgcc
ggggacgccgcgggtgcggtgcccgaccaggcggatgcccagttggacgagggtctggcg
gagcccgggtcgctggcggcgttcctcgagcgggtctcgttggtcgccgacgccgaccag
atcccggatgaggatcagggacaggtcactctcatgaccctgcacaccgccaaggggctg
gagttcccggtggtgttcctcatcggcatggaggacggcctgttccctcacatgcgggcg
ttgggcgacccggcggagctgtccgaggagcgcaggctcgcctacgtggggatcacccgc
gcccgtaagcgcctgtacctgacccgcgcgatgatgcgctcgtcgtgggggcagcccatg
acgaatcccggatcgcggttcctcgaggagatccccaccgaggcgatcgagtggcagcgc
gaggagccggccggtggtggcggattcggggatgacgactcgtacgtcccgcgccgccgc
ttcggaggcggctcgggcggctacggttcgggcgggtacggctcaggtggagccgggtcc
gcgagtagacggtcgtccgggatcccccgcgcgaaggcgtccgcgcccgcgctcgagctg
gcgccgggggaccgggtcacccatgacaagtacggactcggcaaggtgctttcctgcgac
ggcagcgggccgcgggccaccgcgacgatcgacttcggtgcgtcgggcaaggtccggctg
atgctcatcgggggcgtccccatgcagaagctctag
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