Dietzia kunjamensis: NHB83_14060
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Entry
NHB83_14060 CDS
T08346
Symbol
ramB
Name
(GenBank) acetate metabolism transcriptional regulator RamB
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
dkn
Dietzia kunjamensis
Brite
KEGG Orthology (KO) [BR:
dkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dkn03000
]
NHB83_14060 (ramB)
Transcription factors [BR:
dkn03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NHB83_14060 (ramB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_31
HTH_3
HTH_19
HTH_25
HTH_26
Fer2_BFD
Sigma70_r4
HTH_37
Motif
Other DBs
NCBI-ProteinID:
USX45334
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All DBs
Position
2991217..2992671
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AA seq
484 aa
AA seq
DB search
MTASHMGSRLRRLREENGLTQAAFAQSLGLSSSYLNQLEKDARPVTSRVLVKISEVYGVD
SAFFASDSDTRLIAAVTEALTDTQLSAEVPAAEVVDLVRAHPALARAFMLLHQRYRNSAD
LLAALTETRNVPDSSVDRSVLSMPHEEVRDYFYQRQNYIDSLDTAAEDLTTRIRLNRGDV
RAELEHRLAEAHGVRIARRVDLPDGLWHRYSTEDRRLDLSAHLTPGQQAFRVASELAFLE
HRDLLDSLVEEGSFSSPAAVALALRGLASYFAAAVLMPYQRFLDTAEDFRYDVERLMAFH
ASGYETVCHRLSTLQRPGAAGVPFSFVRVDRAGNMSKRQSATGFHFTTSGGTCPLWNIYE
SFSFPGKIMRQVAQMPDGRLHLWVSRTVTTRPMRFGQPRKTFAIGLGCEARHAHRTVYAQ
GLDLDDVDAATKIGSGCRMCDRPACPQRAFPPLNHALRVDAHRSSLSPYLLDQPSAPGGT
AGLP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctcacatatgggatcgcgactccgccgactgcgcgaggagaacggcctgacc
caggccgccttcgcgcagtcgctcggcttgtcgtcgtcgtacctcaaccaactcgagaag
gacgcccgccccgtcacctcccgggtcctggtgaagatctccgaggtctacggcgtggac
tccgcgttcttcgcctcggactcggacacccggctcatcgcggcggtcaccgaggcgctc
accgacacgcagctctccgccgaggtcccggccgccgaggtggtcgacctcgtccgcgcg
cacccggcactcgcccgtgccttcatgctcctgcaccagcgctaccgcaactccgcggat
ctgctcgcggcgctgaccgagacccgcaacgtcccggacagctcggtcgaccgctcggtg
ctgtccatgccgcacgaggaggtgcgggactacttctaccaacggcagaactacatcgac
tccctcgacaccgccgccgaggacctcaccacccgcatccggctcaaccgtggcgacgtc
cgcgccgagctcgaacaccgcctggccgaggcccacggggtccgcatcgcccgccgcgtc
gacctgcccgacgggctgtggcaccgctactccaccgaggaccgccgtctcgacctgtcc
gcccacctcacgcccggccagcaggcgttccgcgtggcctccgagctggccttcctcgag
caccgcgacctgctcgacagcctcgtcgaggagggttcgttcagctcccccgccgccgtc
gcgctcgcgctgcgcggcctggccagctacttcgccgccgccgtgctcatgccctaccag
cgcttcctcgacaccgccgaggacttccgctacgacgtggagcggctcatggccttccac
gccagcggctacgagacggtgtgtcaccgcctgtcgaccctgcagcgaccgggcgcggcc
ggggtgccgttcagcttcgtgcgcgtcgaccgcgccggcaacatgtccaagcggcagtcc
gcgaccgggttccacttcacgacctccggtggcacgtgcccgctgtggaacatctacgag
tcgttctcgttccccggcaagatcatgcggcaggtcgcgcagatgcccgacggccgcctc
cacctgtgggtctcgcgcaccgtcaccacccgtccgatgcgtttcggccagccgcgcaag
acgttcgccatcggcctgggctgcgaggcccgccacgcccaccggaccgtgtacgcgcag
ggcctcgacctcgacgacgtcgacgccgccaccaagatcggctccggctgccgcatgtgc
gaccgccccgcgtgcccgcagcgggccttcccgccgctcaaccacgcgctgcgggtggac
gcccaccggtcctcgctctcgccgtatctcctcgaccaaccgtccgccccaggcgggacc
gctggcctaccctga
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