Dokdonella koreensis: I596_106
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Entry
I596_106 CDS
T04377
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dko
Dokdonella koreensis
Pathway
dko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I596_106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dko03000
]
I596_106
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_106
Enzymes [BR:
dko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
I596_106
Transcription factors [BR:
dko03000
]
Prokaryotic type
Helix-turn-helix
AraC family
I596_106
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I596_106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ANB16146
UniProt:
A0A167G4G6
LinkDB
All DBs
Position
complement(133923..135365)
Genome browser
AA seq
480 aa
AA seq
DB search
MPSPAACERARLTRDRRFDGLFFTAVKSTGIYCRPVCPAPAPKPRNIVYYPSAAAAAAAG
FRPCLRCRPEAAPGSPLHRARSELVAGALRLIEQGALDDGSLPALARRIGVGERHLRRLF
MDELGASPLDVAATRRLLFAKQLVGETGLPITEIAQAAGYASVRRFNAAFSAAYGKPPRE
IRRTRAALANGAADDLVLRLPFRAPYDFAHLAAFYARRAIPGVEVAEALAYRRSFILDGV
PGWFEVAPIAGDEALGLRVHHPRSSTLGTLAARVRRMFDVDADPHALAAVFRRSALLAPL
IRRWPGQRLPGAWDGFELAVRAVLGQQVSVAAARTLAARVAATHGAVYPAGEAVGLGRLF
PTPQHLVEADLEQLGITRARAATIRGLARALLDGRVQFRAEQPLAAFERDLVALPGIGAW
TAHYIAMRALAQPDAFPAADLILRRAAGGDRPLSTRELEQASEAWRPWRAYAVMLLWRAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccccgctgcctgcgaacgggcacggctgacccgcgaccgccgcttcgacggg
ttgttcttcaccgcagtgaaatcgaccggcatctactgccggccggtatgcccggccccg
gcgccgaagccgcgcaacatcgtctactaccccagtgccgcagcggccgcagccgccggc
ttccggccgtgcctgcggtgccggccggaagcggccccgggctccccgctgcatcgtgcc
cgcagcgagctggtggccggcgccctgcgcctgatcgagcaaggtgcgctggacgacggt
tcgctgccggcgctggcccggcgcatcggcgtcggagaacgccatctgcgccgcctgttc
atggacgagctgggcgccagtccgctggatgtggcggcgacgcggcggctgctgttcgcc
aagcagctggtcggcgaaaccggcctgccgatcaccgagatcgcgcaggccgccggctat
gccagcgtgcgtcgtttcaatgccgcgttcagcgccgcctacgggaagccgcctcgcgag
atccgccgcacgcgcgcggcgctcgccaacggcgccgcggacgatctcgtgctgcgcctg
ccgtttcgcgcgccgtatgatttcgcgcacctggcggcgttctacgcgcggcgcgcgatt
cccggggtggaggtcgccgaggcgctggcgtaccggcgcagcttcattctcgacggcgtc
cccggctggttcgaggtcgctccgatcgccggcgacgaagccctgggcctgcgcgtgcac
caccctcgcagcagcacgctcgggaccctcgccgcccgcgtcaggcgcatgttcgacgtc
gacgccgacccgcatgcgctggccgccgtgttccggcgcagcgccctgctggcaccgctg
atccggcgctggcccggccagcgcctgccgggcgcctgggacgggttcgagctggccgtg
cgcgccgtgctcggccagcaggtcagcgtcgccgcggcccgcacgctggcagcccgcgtc
gccgccacccatggcgccgtctatccggccggcgaagccgtcggcctcggccggctgttt
cccacgccgcagcacctcgtcgaggccgacctcgaacaactggggatcacccgcgcacgc
gccgccacgatccgcggcctcgcgcgcgcactgctcgacggccgcgtgcagttccgcgcc
gagcaaccactggccgcattcgagcgcgacctggtggccctgccgggcatcggcgcatgg
accgcccactacatcgcgatgcgcgccctcgcgcagcccgacgcgttcccggcagcggac
ctgatcctgcggcgcgccgccggcggcgaccggccgctgtcgacgcgcgaactggaacag
gcgagcgaggcctggcggccgtggcgcgcctatgcggtcatgctgctgtggcgcgcgagt
tga
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