Dokdonella koreensis: I596_1146
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Entry
I596_1146 CDS
T04377
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dko
Dokdonella koreensis
Pathway
dko00061
Fatty acid biosynthesis
dko00071
Fatty acid degradation
dko01100
Metabolic pathways
dko01212
Fatty acid metabolism
dko02024
Quorum sensing
dko04146
Peroxisome
Module
dko_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I596_1146
00071 Fatty acid degradation
I596_1146
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I596_1146
09145 Cellular community - prokaryotes
02024 Quorum sensing
I596_1146
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dko01004
]
I596_1146
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dko04147
]
I596_1146
Enzymes [BR:
dko01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I596_1146
Lipid biosynthesis proteins [BR:
dko01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I596_1146
Exosome [BR:
dko04147
]
Exosomal proteins
Exosomal proteins of breast milk
I596_1146
Exosomal proteins of breast cancer cells
I596_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANB17176
UniProt:
A0A167GQX7
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All DBs
Position
1362204..1363724
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AA seq
506 aa
AA seq
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MIALADRVAAIALSEPRRVALVQGAQRIDYAGFVEAARRFAGFLRANGCVPGDRVALILP
NRIEAAIAWYGTWIAGAVVVPLNAQARARDFAPWLRHAGARIVVHEAASRDAAEAVGALD
AAPLRIVLDGTGAGAADWAATQAAAPLGVEPTDPAALAAILYTSGTTGAPKGVMLTQANF
AANVAAIVQYLALGPGDSIVSILPFYYSYGASVLHTHLAAGARLVIEPNLVFPHLIVEAL
ARERASGFSGVPSTYALLLDRVALADYDLSCLRYLTQAGGAMAPALAGRLRAALPQAALY
VMYGQTEATARLTYLPPERLDDKPGSAGIAIPGMRIAVHGEAGEALPPGTDGEVWAQGPG
VMAGYWNDPAASAAVLHEGWLRTGDLGRLDAEGFLFLAGRRSDMIKTGAHRVHPLDVEEA
ISELAEVAEVAVVGIDDETLGQAIKAVIVPAAGATPDADRIKAHCRARLAAYKIPKQVQF
VAALPKTASGKIRRALLTESAAQEAS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctctggccgatcgggtcgcggcgatcgccttgtccgagccgcgacgtgtcgcc
ctggtccagggcgcgcagcgcatcgactacgccggcttcgtcgaggcggcgcggcgcttc
gccggtttcctccgcgccaacggctgcgttcccggcgatcgcgtcgcgttgatcctgccc
aaccgcatcgaggcggcgatcgcctggtacggcacgtggatcgccggcgccgtggtggtg
ccgctcaatgcgcaggcgcgtgcgcgcgacttcgcgccgtggctgcgccacgccggcgcg
cgcatcgtcgtccacgaggccgccagccgtgatgcggccgaggcggtcggcgcgctggac
gcggctccgctgcggatcgtgctcgacggcaccggtgccggcgcggcggactgggcggcg
acgcaggcggccgcgccgctcggcgtcgagcccaccgatccggccgcgctggccgcgatc
ctctacacctccggcaccaccggcgcgcccaagggcgtgatgctgacgcaggccaacttc
gccgcgaacgtcgcggcgatcgtccagtacctggcgctggggccgggcgactcgatcgtc
tcgatcctgccgttctactactcctacggcgcctcggtgctgcacacgcacctggcggcc
ggcgcgcggctggtgatcgagccgaacctggtgttcccgcacctgatcgtcgaggcgctg
gcgcgcgagcgggccagcggcttctccggcgtaccctcgacctatgcgctgctgctcgac
cgcgtggcgctggccgactacgacctgtcctgcctgcgctacctgacccaggccggcggt
gcgatggcgccggcactggccgggcggctgcgcgcggcgctgccgcaggcggcgctctac
gtgatgtacggccagaccgaggccaccgcgcgcctgacctacctgccgcccgagcgcctg
gacgacaagcccggctcggccggcatcgcgattcccggcatgcgcatcgcggtgcacggc
gaggccggcgaggcgctgccgcccggcaccgacggcgaggtctgggcacaggggccgggc
gtcatggccggctactggaacgacccggcggccagcgccgcggtgctgcacgaaggctgg
ctgcgcaccggcgacctcggccggctcgacgcggagggcttcctgttcctcgccggccgg
cgcagcgacatgatcaagaccggcgcgcaccgcgtgcacccgctcgacgtcgaggaagcc
atcagcgagctggccgaggtcgccgaggtcgccgtggtcggcatcgacgacgaaacgctc
ggccaggcgatcaaggcggtcatcgtgccggccgccggcgcgacgccggacgccgatcgc
atcaaggcgcactgccgcgcacggctggccgcgtacaagatccccaagcaggtccagttc
gttgcggccctgcccaaaaccgcgtccggtaagatccggcgcgccctgttgaccgaatcc
gccgcgcaggaggcctcgtga
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