Dokdonella koreensis: I596_1361
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Entry
I596_1361 CDS
T04377
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dko03016
]
I596_1361
Enzymes [BR:
dko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I596_1361
Transfer RNA biogenesis [BR:
dko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I596_1361
Prokaryotic type
I596_1361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ANB17389
UniProt:
A0A160DSU7
LinkDB
All DBs
Position
1586390..1587319
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AA seq
309 aa
AA seq
DB search
MGQRDITGIILLDKPQGSTSNQALQRVRRLFGAAKAGHTGSLDPLATGLLPVCFGEATKI
AGLLLGSAKAYETECRLGVVTDTDDAQGAVTVERPVPPLVPDAIVRALAELTGRIVQVPP
VYSAIKRDGEPLYKLARRGVAVQAPPREVEVRRFELVEQRGESLRLRVECGSGTYVRSLV
RDLGERLGCGAHVTVLRRLWVDPFREPRMYDFQTLEAIAAGQGAPALDALLLPLEQGLAA
YPQVRVEASEAARLRQGQPARPAMPAAAGAAVALDGQGRAVALVEVSADGWLRATRGLNV
GGPGAGPAV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaacgcgacatcaccggcatcatcctgctcgacaagccgcagggatcgacctcg
aaccaggccctgcagcgggtgcgacgccttttcggcgcggccaaggccggccataccggc
agtctcgatccgctggcgaccggcctgctgccggtctgcttcggcgaagcgaccaagatc
gccggcctgctgctgggttcggccaaggcgtacgagaccgagtgccggctcggtgtcgtg
accgacaccgacgacgcccagggcgcggtgaccgtcgagcggccggtgccgccgctggtg
ccggacgccatcgtgcgcgccctggcggaactgaccggccgcatcgtccaggtgcccccg
gtgtactcggcgatcaagcgcgacggggagccgctctacaagctggcccgccgcggcgtc
gcggtccaggccccgccgcgcgaggtggaggtgcggcgattcgagctggtcgagcagcgg
ggcgaatcgcttcgcctgcgggtggagtgcggttcgggtacctatgtgcgcagcctggtc
cgcgacctcggcgagcgcctcggctgcggcgcgcacgtgacggtgctgcggcgcctgtgg
gtcgatccgttcagggagccgcggatgtacgacttccagacgctggaagccatcgcggcc
gggcagggcgcgccggcgctggacgccttgctgctgccgttggagcagggcctggccgcc
tacccgcaggtccgcgtggaggcgtccgaagcggctcgcctgcgccagggccagccggcg
cggccggcgatgccggcggcggcgggtgccgcggtggcgctggacggccagggccgggca
gtggccctggtcgaggtttcggcggatggctggctgcgtgccacgcgcggcctcaacgtc
ggcgggccgggcgccgggcccgccgtgtga
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