KEGG   Dokdonella koreensis: I596_1628
Entry
I596_1628         CDS       T04377                                 
Name
(GenBank) Exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dko  Dokdonella koreensis
Pathway
dko03410  Base excision repair
dko03430  Mismatch repair
dko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I596_1628
   03430 Mismatch repair
    I596_1628
   03440 Homologous recombination
    I596_1628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_1628
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     I596_1628
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     I596_1628
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      I596_1628
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: ANB17652
UniProt: A0A167GU69
LinkDB
Position
1876132..1877895
AA seq 587 aa
MAPRAPAAAVSPLTIRRRPAGAASWGSAAGVHPVLERVYAARGIDDPEQVRYRLGAMASP
QALGGIETACRLLAEAMAQDRHICVVGDFDCDGATGTAVAIRGLRLLGAGRVDYRVPNRF
VHGYGLTPALVDTLAEPMPDLVVTVDSGIACLAGVAAAKARGMRVLVTDHHLPGPELPVA
DAIVNPNAPGDGFPSKALAGVGVMFYLLVALRGHLRAAGWFERTGRAEPDLACLLDLVAL
GTVADLVPLDYNNRLLVDAGLRRIRARRACAGILALLESAGREAATTAPADLGFAVAPRV
NAAGRLEDMALGIECLLTDDSGAARSMAERLAAINAERRELQANMLEQGEAFVERWTAER
GPEGLPLGLTLFEDDWHAGVVGLVASKLKDRLNRPVVACAPVLDGGEEVRGSARSIRGVH
VRDVLAEVDARHPGLIGRFGGHAMAAGLTLQRAAVPRFAAAFDAVIRERAAPELFEPVLL
SDGELAPGDFTGELAGQLRYAGPWGQGFAEPLFDGEFAVASWRVVAERHLGLSLRLPGRE
DPLNAIQFHGWSGEPPPARLRLAYRLVPDDYRGKGAVQLIVEHRQSV
NT seq 1764 nt   +upstreamnt  +downstreamnt
gtggcgccgcgtgcgcccgctgcagcggtgagcccgctcacgatccgccgccggccggct
ggcgcggcctcctggggctcggcggccggcgtgcatccggtactggagcgcgtctacgcc
gcgcgcggcatcgacgatccggaacaggtccgctatcggctgggcgcgatggcgtcgccg
caggccttgggcggcatcgagacggcgtgccgcttgctggccgaggcgatggcccaggac
cggcacatctgcgtggtcggcgacttcgattgcgacggggcgaccggcaccgccgtcgcg
atccgcggactgcgcctgctcggtgccggtcgcgtggactaccgcgtcccgaaccgcttc
gtccacggctacggcctgacgccggcgctggtcgacacattggccgagccgatgccggac
ctggtcgtgaccgtcgacagcggcatcgcctgcctggcgggcgtcgcggcggcgaaggcg
cgcggcatgcgcgtgctggtcaccgatcatcacctgccgggcccggagctgccggtcgcc
gacgcgatcgtcaatcccaatgcccccggcgacggctttccgagcaaggcgctggcgggc
gtcggcgtgatgttctacctgctggtcgccctgcgcggccacctgcgcgccgccggctgg
ttcgagcgcaccgggcgggcggagcccgacctggcctgcctgctcgatctggtggcgctg
ggaacggtggccgacctggtgccgctcgactacaacaaccgcctgctggtcgatgccgga
ctgcggcggatccgcgcgcgccgcgcctgcgccggcatcctggcgctgctggaatcggcc
ggccgtgaagcggccaccaccgcacccgccgacctcggcttcgcggtcgcgccgcgcgtc
aacgccgccgggcggctggaggacatggcgctcgggatcgaatgcctgctgaccgacgat
tccggtgcggcgcgttcgatggccgaacgcctcgccgcgatcaacgccgagcgtcgcgag
ctgcaggccaacatgctcgagcagggcgaggccttcgtcgagcgctggaccgccgagcgc
gggcccgaaggactgccgctggggctgaccttgttcgaggacgactggcatgcgggcgtg
gtgggcctggtcgcctccaagctcaaggaccgcctgaaccggccggtcgtcgcctgcgcg
ccggtgctggacggcggcgaggaggtgcgcggttcggcccgttcgattcgcggcgtgcac
gtgcgcgatgtgctggcggaggtcgacgcgcgccatccgggcctgatcgggcgtttcggt
ggccacgcgatggccgccggactcaccctgcagcgtgccgccgtgccgcgcttcgccgcc
gccttcgatgccgtcatccgcgagcgcgcggcaccggagctgttcgagccggtcctgctc
agcgacggggaactggcgcccggagacttcaccggcgagctggccggccagttgcgctac
gcagggccttgggggcagggcttcgccgagccgctgttcgacggcgagttcgcggtggcc
agctggcgcgtcgtcgccgagcggcatctggggctgagcctgcggctgccgggacgcgag
gaccctctcaatgcgatccagttccacggctggagcggcgagccgccgcccgcgcgcctc
cggctcgcctatcggctggtgccggacgactaccgcgggaaaggggccgtgcagctgatc
gtggagcaccgccagtccgtgtga

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