Dokdonella koreensis: I596_1837
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Entry
I596_1837 CDS
T04377
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dko03009
]
I596_1837
Enzymes [BR:
dko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
I596_1837
Ribosome biogenesis [BR:
dko03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I596_1837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ANB17860
UniProt:
A0A160DUT7
LinkDB
All DBs
Position
complement(2114323..2116002)
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AA seq
559 aa
AA seq
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MTTPRSVLSLKRNDSTAPALEERLHKVLATAGLGSRRLLEQRIESGEVQVNGGVATLGSG
VRIGDRVEIDGKRFVVVSDSAEQAQVLVYNKPEGVVITREDPEGRPTVFEQLPRIKGARW
IAVGRLDINTTGLLLLTTDGDLANALMHPRSELEREYICRVHGEVPDEVIERLRSGIELE
DGPAHFDDVGVISRSGSHSWFRIVIREGRNREVRRMWESQGLMVSRLKRVRYANVELPRL
LKRGQSEPLDAQAVRKLRDSAGAPESAPRLTLAPVIGQRRATTTEFRPDPKTQQAWTAAR
NDEAREFAAFDRIRDDGWRAPSGKPGKKRRPGAGPGAGPRGPGGPGGRNPNQRGPGARPG
GPRSGKPAGAGAGKPRRAPHAPQPQHANANPAFAEPGINPAVLRSWFPDAGNGPGRKPRR
GPGPGQAVPHGSFGHQDGGNRGSRDGNRAVEPRAVDGNSTAYWNSAPGASPSSPYGRGAP
RGKGRDGARGGPPRPDGGGPRPPGRGARPGGPGPRPAGGNGPRPGGGNGPRPGGGNNRPR
PGGNASRGRGGGGGNRGPR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccccgttccgtcctttccctcaagcgcaacgactcgaccgccccggcactc
gaagagcgcctgcacaaagtgctggcgaccgccggactcggctcgcgccgcctgcttgag
cagcgcatcgaatccggcgaggtccaggtcaacggcggcgtcgcgacgctcggctcgggc
gtgcgcatcggcgaccgcgtcgagatcgacggcaaacgcttcgtcgtcgtcagcgacagc
gccgaacaggcccaggtcctggtctacaacaagcccgaaggtgtcgtcatcacgcgtgag
gatccggaagggcgcccgacggtgttcgagcagctgccgcgcatcaagggcgcgcgctgg
atcgccgtcggccggctcgacatcaacaccaccggcctgctgctgctgacgaccgacggc
gacctggccaacgcgctgatgcatccgcgctcggagctggaacgcgaatacatctgccgc
gtccacggcgaagtgcccgacgaggtgatcgagcgcctgcgcagcggcatcgagctggag
gacggcccggcccatttcgacgatgtcggcgtcatcagccgcagcggcagccattcctgg
ttccgcatcgtgatccgcgaaggccgcaaccgcgaagtgcgccgcatgtgggaatcgcag
gggctgatggtcagccgcctcaagcgggtccgctatgccaacgtcgaactgccgcgcctg
ctcaagcgcggccagtccgagccgctcgacgcccaggccgtgcgcaagctgcgcgactcg
gccggcgcgcccgaatcggcaccgcggctgacgctggcgccggtcatcggccagcgccgc
gcgacgacgaccgagttccggccggaccctaagacccagcaggcctggaccgccgcccgc
aacgacgaggcacgcgagttcgccgcgttcgaccgcatccgtgacgacggctggcgcgcg
ccctccggcaagcccggcaagaagcgccgtcccggcgccggccccggtgccggcccgcgc
ggtcccggggggcccggcggccgcaatccgaatcaacgcgggcccggcgcacgtccgggc
ggcccgcgcagcggcaagccggccggtgccggtgcgggcaagccccggcgggcgccgcac
gcgccgcagccgcagcatgccaatgccaatcccgccttcgccgaaccgggcatcaatccg
gccgtgctgcgcagctggttcccggatgccggcaatggcccgggccgcaagccgcgccgc
ggccccggaccgggccaggccgtaccgcacggcagcttcggtcatcaggacggcggcaac
cgtggcagccgcgacggcaatcgcgccgtggagccgcgtgcggtcgacggtaacagcacc
gcctactggaactcggcgcccggcgcttcgccgtcgagcccgtacggacgcggcgcgccg
cgcggaaaggggcgcgacggcgcccgcggcggcccgccgcggcccgatggcggtggtccg
cggccgcccggacgcggtgcgcgccccggcggcccgggtccgcgccccgccggcggcaat
ggtccacgtccgggtggtggcaacggaccgcgccccggtggcggcaacaaccggccgcgc
ccgggcggcaatgcctcgcgcggccgtggtggtggcggcggcaaccgcgggccgcgctga
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