Dokdonella koreensis: I596_1965
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Entry
I596_1965 CDS
T04377
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dko03021
]
I596_1965
Transcription machinery [BR:
dko03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
I596_1965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
IMPDH
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANB17987
UniProt:
A0A160DU72
LinkDB
All DBs
Position
complement(2248478..2251306)
Genome browser
AA seq
942 aa
AA seq
DB search
MQLTPGQRWISNAEPELGLGTILRIEGRGVQVLYATSGVLRQYALHAAPLTRAEFRPGQK
VQGKGLTLTVEQVQSEDGLLVYHGQGLRLAESELDDTQPISRADERLVSVRLDRSDRFDF
RLDALQRRAAVLRSPAWGLASARVDLIPHQLRVAAAAAGRQPLRVLLADEVGLGKTIEAG
MILSRLLAAGRAGRVLVLAPESLVHQWFVELLRRFNLQFALYDEERCEAIETGGDDRNPF
GDEQLVIASIGFLADNAKRSAQAIEAGWDVVVVDEAHHLAWTPDAASAGYTLIETLAGRV
PGLILLTATPEQLGRSGHFARLRLLDPARFHALDRYVAEADGYAELSAVAARLKDGDPLS
DADRTVLQRRFGGDPELLALLDSGSDSDALLDALIDRHGTGRVMFRNRRAQIGGFPKRLP
ELQFLDATVLDDQGRQRLLAEFQADLQAADAGIEVSYADDPRLPWLIDRIENDAGEKLLL
ICRSQAKVLALEEALRTRSGVKVARFHEGMSLVQRDRNAAYFADPDGARVLLCSEIGSEG
RNFQFARHLVLWDLPFDPDLLEQRIGRLDRIGQKHDIRIHLCVVRGSAQQALVRWYEEGL
DAFRRSPADGRELLKRYGTRVAQAAIEHARGGEDADAELDALIAETRATHEELSAIVHAG
RDRLLELASERDAHGEDLTEALAMLDADTGARDFILRLFEQFGVESEDQGGGLILLDPEY
LSTDGFPGLKDGAQQATFQRPVALAREDIPLLRLDHPMVAGAVDLLLESEQGNAAFLVDT
SLPARTALLECVFVLDCVADRRLGVDRFLPPLPIRVVVDSRLQERADFRPQADVRANERT
LDPARYRPILGKLVPPLLAHAETRVREYSQVEIGAAVTAAEQRLGAEQARLTALARVNPA
VRLEEIAAIGAELDALREAIPKAAARLDAVRLVCSPDFLALR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttacccccggacaacgctggatctccaacgccgaacccgagctggggctcggc
acgatcttgcgcatcgaggggcgtggcgtgcaggtgctgtacgcgacatcgggcgtactg
cgccagtacgcgctgcatgccgcaccgctgacgcgcgcggagttccggcccgggcagaag
gtccagggcaagggactgacgctcaccgtcgagcaggtccaatccgaggacgggctgctg
gtctaccacggccaggggctgcggctcgccgaatcggaactggacgatacccagccgatc
tcgcgcgccgacgagcgcctggtgtcggtacggctcgatcgcagcgaccgcttcgatttc
cgcctggacgcgctgcagcggcgcgcggcggttctgcgctccccggcctggggcctggcc
tcggcgcgggtggatctgattccgcaccagttgcgcgtggccgcggccgccgccggccgg
cagccgttgcgcgtgctgctcgccgacgaggtcggtctcggcaagacgatcgaggcgggc
atgattctcagccggctgctggccgccggccgggccgggcgcgtgctcgtgctcgccccg
gaaagcctcgtccaccagtggttcgtcgagctgctcaggcgtttcaacctgcagttcgcg
ctctacgacgaggagcgctgcgaggcgatcgagaccggcggcgacgaccgcaacccgttc
ggtgacgaacaattggtgatcgccagcatcggcttcctcgcggacaacgcgaaacggtcc
gcgcaggcgatcgaggccggctgggacgtcgtcgtcgtcgacgaggcgcaccacttggcc
tggacgccggatgccgcgagcgccggctacacgctgatcgaaacgctggccggacgcgtg
cccggactgatcctgctgacggcgacgccggaacagctggggcgcagcggccatttcgca
cgcctgcgcctgctcgacccggcccgcttccacgcgctggatcgctacgtcgccgaagcg
gacggctacgccgagctgtcggcggtcgccgcccggctcaaggacggcgatccgctgtcc
gatgcggatcggacggtattgcagcggcgcttcggcggcgatccggaactgctggccctg
ctcgacagcggaagcgacagcgatgccctgctcgacgcgctgatcgatcgtcacggcacc
gggcgtgtcatgttccgcaaccggcgcgcgcagatcggcgggtttccgaagcgcctgccc
gagctgcagttcctcgatgccacggtgctcgacgaccagggccggcagcgcctgctggcc
gagttccaggccgacctgcaggccgccgatgccggcatcgaggtcagttatgccgatgat
ccgcgcctgccctggctgatcgaccggatcgagaacgacgccggcgagaagctgttgctg
atctgccgcagccaggcgaaggtgctggccctcgaagaagccctgcgcacgcgcagcggc
gtcaaggtggcccgcttccacgaaggcatgagcctggtccagcgcgaccgcaatgcggcc
tatttcgccgatccggacggcgcgcgcgtgctgctgtgctcggagatcggctcggaaggc
cgcaacttccagttcgcgcgtcatctggtgctgtgggacctcccgttcgatccggacctg
ctcgaacagcgtatcggccggctcgaccgcatcggccagaagcacgacatccgcatccat
ctgtgcgtggtgcggggcagcgcgcagcaggccctggtgcgctggtacgaagagggcctg
gacgcgttccgccgcagtccggccgacggccgcgaactgctcaagcgctacggcacgcgc
gtggcgcaggcggcgatcgaacatgcccgcggcggcgaggatgcggatgccgagctcgat
gcgctgatcgccgagacgcgcgccacgcacgaggagctttcggcgatcgtccatgccgga
cgcgaccgcctgctcgaactggccagcgaacgcgacgcccacggcgaggacctgaccgag
gcgctggcgatgctcgacgccgataccggcgcgcgcgacttcattctgcggctgttcgag
cagttcggcgtcgaaagcgaggaccaggggggcggcctgatcctgctcgatccggagtac
ctgagcaccgacggttttccgggactcaaggacggcgcccagcaggcgaccttccagcgt
ccggtcgcgctcgcgcgcgaggacatcccactgttgcgcctggatcatccgatggtcgcg
ggcgccgtcgacctgctgctggaaagcgagcagggcaacgcggcgttcctcgtcgacacc
agcctgcccgcccgtaccgccctgctcgaatgcgtcttcgtgctcgactgcgtcgccgat
cgccgcctcggcgtcgaccggttcctgccgccgctgccgatccgcgtcgtcgtcgattcg
cgcttgcaggaacgcgccgatttccggccccaggccgacgtgcgcgccaacgagcggacg
ctggatccggcccgctaccggccgatcctcggcaagctggtgccgccgctgctggcccac
gcggaaacccgcgtgcgcgagtacagccaggtcgagatcggtgccgccgtgacggcggcc
gagcagcggctcggggccgagcaggcacgcctgaccgcgctggcccgcgtcaaccccgcg
gtgcgactcgaggagatcgccgcgatcggtgccgaactcgacgcgctgcgcgaagcgatc
ccgaaggccgccgcgcgtctggacgcggtccgcctggtctgcagcccggacttcctggcg
ttgcgctga
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