KEGG   Dokdonella koreensis: I596_1965
Entry
I596_1965         CDS       T04377                                 
Name
(GenBank) ATP-dependent helicase HepA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dko  Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:dko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dko03021]
    I596_1965
Transcription machinery [BR:dko03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     I596_1965
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Helicase_C SNF2-rel_dom ResIII Tudor_RapA DEAD IMPDH Flavi_DEAD
Other DBs
NCBI-ProteinID: ANB17987
UniProt: A0A160DU72
LinkDB
Position
complement(2248478..2251306)
AA seq 942 aa
MQLTPGQRWISNAEPELGLGTILRIEGRGVQVLYATSGVLRQYALHAAPLTRAEFRPGQK
VQGKGLTLTVEQVQSEDGLLVYHGQGLRLAESELDDTQPISRADERLVSVRLDRSDRFDF
RLDALQRRAAVLRSPAWGLASARVDLIPHQLRVAAAAAGRQPLRVLLADEVGLGKTIEAG
MILSRLLAAGRAGRVLVLAPESLVHQWFVELLRRFNLQFALYDEERCEAIETGGDDRNPF
GDEQLVIASIGFLADNAKRSAQAIEAGWDVVVVDEAHHLAWTPDAASAGYTLIETLAGRV
PGLILLTATPEQLGRSGHFARLRLLDPARFHALDRYVAEADGYAELSAVAARLKDGDPLS
DADRTVLQRRFGGDPELLALLDSGSDSDALLDALIDRHGTGRVMFRNRRAQIGGFPKRLP
ELQFLDATVLDDQGRQRLLAEFQADLQAADAGIEVSYADDPRLPWLIDRIENDAGEKLLL
ICRSQAKVLALEEALRTRSGVKVARFHEGMSLVQRDRNAAYFADPDGARVLLCSEIGSEG
RNFQFARHLVLWDLPFDPDLLEQRIGRLDRIGQKHDIRIHLCVVRGSAQQALVRWYEEGL
DAFRRSPADGRELLKRYGTRVAQAAIEHARGGEDADAELDALIAETRATHEELSAIVHAG
RDRLLELASERDAHGEDLTEALAMLDADTGARDFILRLFEQFGVESEDQGGGLILLDPEY
LSTDGFPGLKDGAQQATFQRPVALAREDIPLLRLDHPMVAGAVDLLLESEQGNAAFLVDT
SLPARTALLECVFVLDCVADRRLGVDRFLPPLPIRVVVDSRLQERADFRPQADVRANERT
LDPARYRPILGKLVPPLLAHAETRVREYSQVEIGAAVTAAEQRLGAEQARLTALARVNPA
VRLEEIAAIGAELDALREAIPKAAARLDAVRLVCSPDFLALR
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgcagcttacccccggacaacgctggatctccaacgccgaacccgagctggggctcggc
acgatcttgcgcatcgaggggcgtggcgtgcaggtgctgtacgcgacatcgggcgtactg
cgccagtacgcgctgcatgccgcaccgctgacgcgcgcggagttccggcccgggcagaag
gtccagggcaagggactgacgctcaccgtcgagcaggtccaatccgaggacgggctgctg
gtctaccacggccaggggctgcggctcgccgaatcggaactggacgatacccagccgatc
tcgcgcgccgacgagcgcctggtgtcggtacggctcgatcgcagcgaccgcttcgatttc
cgcctggacgcgctgcagcggcgcgcggcggttctgcgctccccggcctggggcctggcc
tcggcgcgggtggatctgattccgcaccagttgcgcgtggccgcggccgccgccggccgg
cagccgttgcgcgtgctgctcgccgacgaggtcggtctcggcaagacgatcgaggcgggc
atgattctcagccggctgctggccgccggccgggccgggcgcgtgctcgtgctcgccccg
gaaagcctcgtccaccagtggttcgtcgagctgctcaggcgtttcaacctgcagttcgcg
ctctacgacgaggagcgctgcgaggcgatcgagaccggcggcgacgaccgcaacccgttc
ggtgacgaacaattggtgatcgccagcatcggcttcctcgcggacaacgcgaaacggtcc
gcgcaggcgatcgaggccggctgggacgtcgtcgtcgtcgacgaggcgcaccacttggcc
tggacgccggatgccgcgagcgccggctacacgctgatcgaaacgctggccggacgcgtg
cccggactgatcctgctgacggcgacgccggaacagctggggcgcagcggccatttcgca
cgcctgcgcctgctcgacccggcccgcttccacgcgctggatcgctacgtcgccgaagcg
gacggctacgccgagctgtcggcggtcgccgcccggctcaaggacggcgatccgctgtcc
gatgcggatcggacggtattgcagcggcgcttcggcggcgatccggaactgctggccctg
ctcgacagcggaagcgacagcgatgccctgctcgacgcgctgatcgatcgtcacggcacc
gggcgtgtcatgttccgcaaccggcgcgcgcagatcggcgggtttccgaagcgcctgccc
gagctgcagttcctcgatgccacggtgctcgacgaccagggccggcagcgcctgctggcc
gagttccaggccgacctgcaggccgccgatgccggcatcgaggtcagttatgccgatgat
ccgcgcctgccctggctgatcgaccggatcgagaacgacgccggcgagaagctgttgctg
atctgccgcagccaggcgaaggtgctggccctcgaagaagccctgcgcacgcgcagcggc
gtcaaggtggcccgcttccacgaaggcatgagcctggtccagcgcgaccgcaatgcggcc
tatttcgccgatccggacggcgcgcgcgtgctgctgtgctcggagatcggctcggaaggc
cgcaacttccagttcgcgcgtcatctggtgctgtgggacctcccgttcgatccggacctg
ctcgaacagcgtatcggccggctcgaccgcatcggccagaagcacgacatccgcatccat
ctgtgcgtggtgcggggcagcgcgcagcaggccctggtgcgctggtacgaagagggcctg
gacgcgttccgccgcagtccggccgacggccgcgaactgctcaagcgctacggcacgcgc
gtggcgcaggcggcgatcgaacatgcccgcggcggcgaggatgcggatgccgagctcgat
gcgctgatcgccgagacgcgcgccacgcacgaggagctttcggcgatcgtccatgccgga
cgcgaccgcctgctcgaactggccagcgaacgcgacgcccacggcgaggacctgaccgag
gcgctggcgatgctcgacgccgataccggcgcgcgcgacttcattctgcggctgttcgag
cagttcggcgtcgaaagcgaggaccaggggggcggcctgatcctgctcgatccggagtac
ctgagcaccgacggttttccgggactcaaggacggcgcccagcaggcgaccttccagcgt
ccggtcgcgctcgcgcgcgaggacatcccactgttgcgcctggatcatccgatggtcgcg
ggcgccgtcgacctgctgctggaaagcgagcagggcaacgcggcgttcctcgtcgacacc
agcctgcccgcccgtaccgccctgctcgaatgcgtcttcgtgctcgactgcgtcgccgat
cgccgcctcggcgtcgaccggttcctgccgccgctgccgatccgcgtcgtcgtcgattcg
cgcttgcaggaacgcgccgatttccggccccaggccgacgtgcgcgccaacgagcggacg
ctggatccggcccgctaccggccgatcctcggcaagctggtgccgccgctgctggcccac
gcggaaacccgcgtgcgcgagtacagccaggtcgagatcggtgccgccgtgacggcggcc
gagcagcggctcggggccgagcaggcacgcctgaccgcgctggcccgcgtcaaccccgcg
gtgcgactcgaggagatcgccgcgatcggtgccgaactcgacgcgctgcgcgaagcgatc
ccgaaggccgccgcgcgtctggacgcggtccgcctggtctgcagcccggacttcctggcg
ttgcgctga

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