Dokdonella koreensis: I596_2029
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Entry
I596_2029 CDS
T04377
Name
(GenBank) Exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dko
Dokdonella koreensis
Pathway
dko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I596_2029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_2029
Enzymes [BR:
dko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I596_2029
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I596_2029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ANB18049
UniProt:
A0A160DUD5
LinkDB
All DBs
Position
complement(2321205..2324609)
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AA seq
1134 aa
AA seq
DB search
MSWNGSGLIVHRASRIERLAERLARELEAQRPDDPLRPQTVLVAHPGLKRWLLGEFARRP
DAGGDGIAANFDMPLPWQWFERTADALLGASGAPGASWHGEVLRWRILAALPQIDAAPIR
AYLEGDDAARRSFQLAEHLAGVYTQYLIYRADWILAWEADAPQAAGDWQAQLWRALQPGA
APHRARRAAPLARLLARGTGGQGPLHVFGVSHLPPDVLAALRALAVHQPVHLYFPDPCRE
HWTELRRQRDLLRLEDDPDALYYEVGHPLLVALGRIAQDFCLALDDGDAIEERDPADEDD
ADVAGVPLLERLQASIRRLQPELAGDAGRLPPLDDASLRVHACHTRLRELEVLKDAILRA
LADDPALAHCDIVVMAPDIAAYAPYVAAVFGAPAQYRADPHHVPWHLSDVGLARQHPSIA
AFDGLLDLAESRFTVSEVMDLLDVPAIARRFAIDPAGREAVEKWLHRARVAWGLDAAAKA
EAGGAPIDANSWRFGFDRLYAGLLLGADGERVLLDGMLPLAGVGGGAVEALGQLDHLLGE
LRRLRDAMAVPRPLAGWRDWLLGCIDALFLPDPADTAEVAAIDALRRQVAALAAQAREAQ
LTLPQPWRVVRDALRGQLQAVPERQPFLLGGVTFCGLVPQRSIPFGMVCLLGMNEGEFPR
AGGDSGLNRMAAHPRRGDRDTRSEDRYLFLEALMAARQRLHVSYVGIGVHDGRPRNPAAP
LAELLLFLDEAHGLAEDDATARPWRVTHPLQPFDPRYYERDAEGRPLHDARLYSYDRTYL
APPATQPPESRFLDLAALPALPVQPDEEATLAALVRYWRDPSRELLLRGAGISLAAADAA
AWPDHEPLESGVAALDRFDRRLLFDALAEDAAGIPTTAPDWLARAGLLPAGAPGVRTYAS
ARAAAVAALQAAREAIGGGPLAREPRAVDLVLAGERRLTGRSQRLFRSAGGELLLFDAQP
ARPADFRDLLPLYVEWAALRLAPDPPARAVFVEGGPSGRPRAGIPPLLAAILAQQPAELE
AGLGRLVELWRTRRERPLLFFPRTAWAHAGAVPGERRVRAQRQWLGDDAGWQRGERDYAP
GYAGLLARGLALFDPATPAGDAFAAAVATICTVLDPHRSVLLRDDGAGPDGASS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaacggcagcggcctgatcgtccatcgcgccagccgcatcgaacgcctggcc
gagcgtctcgcgcgcgaactggaagcccagcgaccggacgatcctctgcggccgcagacg
gtgctggtcgcgcaccccggtctcaagcgctggctgctcggcgagttcgcgcggcggccg
gacgccggcggcgacggcatcgccgccaacttcgacatgccgctgccgtggcagtggttc
gagcggaccgccgatgcgctgctcggcgcgagcggagcgcccggcgcctcctggcacggc
gaggtgctgcgctggcgcatcctggccgcgctgccgcagatcgacgccgcaccgattcgc
gcctacctcgaaggcgacgacgcggcacgccgcagcttccagctggccgaacacctggcc
ggtgtctatacccagtacctgatctaccgcgccgactggatcctggcctgggaagccgac
gcgccccaggccgccggcgattggcaggcccagttgtggcgcgccttgcagccgggcgcc
gcgccgcatcgcgcgcggcgggcggccccgctggcgcgcctcctggcgcgcggcacgggc
gggcaggggccgctgcacgtcttcggcgtcagccacctgccgcccgatgtcctggccgcg
ctgcgcgcgctggccgtgcaccagccggtgcacctgtattttcccgatccgtgccgcgag
cactggaccgagctgcggcggcagcgcgacctgctgcgcctggaggacgatccggacgcg
ctctactacgaggtcggccatcccctgctggtcgcgctcggccgcatcgcgcaggacttc
tgcctggcgctggacgacggtgacgcgatcgaggagcgcgatccggccgacgaggacgat
gccgatgtcgccggcgtgccgctgctggagcgactgcaggcgagcatccgccgtttgcag
ccggagctggcgggcgatgccggtcgtctgccgccgctcgacgacgccagcctgcgcgtg
cacgcctgccacacccggctgcgcgagctggaggtgctcaaggatgcgatcctgcgcgcc
ctggccgacgatcccgcgctcgcgcactgcgacatcgtcgtgatggcgccggacatcgcc
gcctatgcgccgtacgtcgcggcggtgttcggcgcgccggcacaatatcgcgccgacccg
caccacgtcccctggcatctttcggatgtcggcctggcgcgccagcatccgtcgatcgcc
gcgttcgacggcctgctcgacctggccgaaagccggttcacggtcagcgaggtcatggac
ctgctcgacgtgccggcgatcgcgcggcgcttcgcgatcgatcccgccgggcgcgaagcg
gtcgagaaatggctgcaccgtgcgcgcgtcgcctggggcctggacgccgcggccaaggcc
gaagccggcggtgcgccgatcgacgccaactcgtggcgcttcggcttcgaccggctctat
gccgggctcctgctcggtgccgacggcgagcgcgtcctgctcgacggcatgctgccgctg
gccggtgtcggcggcggcgcggtcgaggcgctcggccagctcgaccacctgctcggcgaa
ctgcggcggttgcgcgacgcgatggccgtgccgcggccgctcgcgggctggagggactgg
ctgctcggttgcatcgatgcactgttcctgccggacccggccgacacggccgaggtcgcg
gcgatcgacgcgctgcgccggcaggtcgccgcattggccgcgcaggcgcgcgaggcgcag
ctgacgctgccccagccgtggcgcgtggtccgcgatgccttgcgcgggcagttgcaggcg
gtgcccgagcgccagccgttcctgctcggcggcgtcacgttctgcggcctggtgccgcaa
cgctcgattccgttcggcatggtctgcctgctcggcatgaacgagggcgagttcccgcgg
gccggcggcgactcgggactcaaccgcatggccgcgcatccgcgtcgcggcgatcgcgat
acgcgcagcgaggaccgctacctgttcctcgaagccctgatggcggcgcggcagcgcctg
cacgtcagctacgtcggcatcggcgtgcacgacggccgcccgcgcaatccggccgcgccg
ctggccgagctgctgctgttcctcgacgaggcgcacggcctggccgaggacgatgcgacc
gcccgcccgtggcgcgtcacgcatccgttgcagccgttcgatccgcgctactacgagcgc
gacgccgagggccggccgctgcacgatgcgcgcctgtactcgtatgaccggacgtacctg
gcaccgcccgcgacgcaaccgccggagtcgcggttcctcgacctggccgcgctgccggcg
ctgccggtgcagcccgacgaggaggcgacgctggccgcgctggtgcgctactggcgcgac
ccgtcgcgcgaactgctgctgcgcggcgcgggcatcagcctggcggccgccgatgcggcg
gcctggcccgatcacgagccgctcgagagcggcgtcgccgcgctggatcgcttcgatcgc
cggctgctattcgatgccttggccgaagacgccgccgggatccccaccacggcaccggac
tggctggcacgcgccggactgctgccggcgggcgcgccgggcgtgcgcacctacgcctcc
gcgcgtgccgccgccgtcgccgccctgcaggcggcgcgcgaggccatcggcggtgggccg
ctggcgcgtgaaccccgcgccgtcgatctcgtgctcgccggcgagcggcgcctgaccggc
cgcagccagcgcctgtttcgcagcgccggcggcgagctgctgctgttcgacgcccagccg
gcgcgcccggccgattttcgcgacctgctgccgctgtatgtcgagtgggcggcgctgcgg
ctggcgccggatccgcccgcgcgcgcggtcttcgtcgaaggtggcccgagcgggcggcca
cgtgccggcatcccgccgctgctggccgcgatcctggcgcagcagccggccgagctggag
gcgggcctcggccggctggtcgagctgtggcggacgcgccgcgaacggccgctgctgttc
ttcccgcgcaccgcctgggcccatgccggtgccgtacctggcgaacgccgggtccgcgcg
cagcgccagtggctgggcgacgatgcgggctggcaacgcggcgagcgcgactatgcgccg
ggctacgccggcctgctggcgcgcggactggccttgttcgatccggcgacgccggcgggc
gatgcgttcgccgccgcggtcgcgacgatctgcacggtgctcgacccgcaccgcagcgtg
ctgctgcgcgacgacggcgccggaccggacggagcgtcatcgtga
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