Dokdonella koreensis: I596_2126
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Entry
I596_2126 CDS
T04377
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dko
Dokdonella koreensis
Pathway
dko03030
DNA replication
dko03430
Mismatch repair
dko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I596_2126
03430 Mismatch repair
I596_2126
03440 Homologous recombination
I596_2126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dko03032
]
I596_2126
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_2126
Enzymes [BR:
dko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I596_2126
DNA replication proteins [BR:
dko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I596_2126
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I596_2126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
AMP_N
Motif
Other DBs
NCBI-ProteinID:
ANB18145
UniProt:
A0A160DUK1
LinkDB
All DBs
Position
complement(2437894..2438598)
Genome browser
AA seq
234 aa
AA seq
DB search
MRQIVLDTETTGLEVNKGHRLIEIGCIELAERRPTGRSFHRYLNPDRAIDEGAKAVTGIE
DEFLLDKPRFHEIAGEFIAFVDGAEVIAHNASFDVGFINAELALAGIGGTIQQRVQVIDT
LQLAREMWPGQRNGLDALCKRLGVDNSHRELHGALLDAQLLADVYLAMTAGQGDLGFASE
ASPAGVARRERTLVVIPLRVQRADPDEAASHAARLAAIEKAGKAPSLWTQLGWD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatcgtcctggataccgagaccaccggtctggaggtcaacaagggccaccgg
ctgatcgagatcggctgcatcgagctggccgagcgccggccgaccggtcgcagcttccac
cgctacctgaatccggatcgcgcgatcgacgagggcgccaaggcggtgaccggcatcgag
gacgagttcctgctcgacaagccgcgcttccatgaaatcgccggggagttcatcgcgttc
gtcgacggcgccgaggtgatcgcccacaacgccagcttcgacgtcggcttcatcaacgcc
gagctggcactggccggcatcggcggaacgatccagcagcgcgtgcaggtgatcgacacg
ctgcagctggcgcgcgagatgtggcccggccagcgcaacggcctggatgcgctctgcaag
cggttgggcgtcgacaacagccaccgcgagctgcacggcgccttgctcgacgcgcagctg
ctggccgacgtctacctggcgatgacggcggggcagggcgatctcggcttcgcgagcgag
gcatcgcctgccggtgtcgcgcggcgcgagcgcaccctggtcgtgattccgctgcgcgtg
cagcgtgccgatccggacgaggccgccagccacgcggcgcggctggcggcgatcgagaag
gccggtaaggcgccgagcctgtggacgcagctcggctgggattga
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