Dokdonella koreensis: I596_2445
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Entry
I596_2445 CDS
T04377
Name
(GenBank) Putative DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dko03032
]
I596_2445
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_2445
Enzymes [BR:
dko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I596_2445
DNA replication proteins [BR:
dko03032
]
Prokaryotic type
DNA Topoisomerases
I596_2445
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I596_2445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ANB18453
UniProt:
A0A160DWZ2
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All DBs
Position
complement(2810498..2811628)
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AA seq
376 aa
AA seq
DB search
MTTRRRDRKPPRRPPQDRAAQDEAAIAREAGLVHVRDDAPGIRRRRSGAGFIYLDADGTR
IRDAAQLARIRALAVPPAYTEVWICRDPRGHLQATGRDARRRKQYRYHARWRVFRDRSKF
VRLVAFGQALPRLRRRLRRDLALPGLPCEKVVAVVVSLLAETLARVGNEAYARDNRSFGL
TTLRNRHVASLRGGRLSLRFRGKGGLEHAMVVDDQRLARIVARCHQLPGQLLFQYLDEDG
VCQPVDSGQVNAYLRDAMGEDFTAKDFRTWGGTLLAVAALARTPLPDPGDERALAAGAAA
VVREVAAALRNTPAVCRTSYIDPRVFDVWRRGRLHRLASQHGSGGPRRLEGLALRVLRDR
PGVGGRPSGTPRRRAR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgccggcgtgaccgcaagccgccccgccgcccgccgcaggaccgggccgcc
caggacgaggccgccatcgcgcgcgaggccggcctggtccacgtgcgcgacgacgcgccc
ggtatccgccgccggcgcagcggggcgggcttcatctacctcgatgccgacggcacacgg
atccgcgacgccgcacagctggcgcgcatccgcgcgctggcggtgccgccggcctacacc
gaggtgtggatctgccgcgatccgcgcggccacctgcaggcgaccggccgcgacgcgcgg
cggcgcaagcagtatcgctaccacgcgcgctggcgcgtcttccgcgatcgcagcaagttc
gtgcgcctggtcgcgttcggacaggcgctgccccggctgcggcgacggctgcgccgcgac
ctggcgctgcccggcctgccgtgcgagaaggtcgtggcggtggtcgtctcgctcctggcc
gagaccctggcgcgggtcggcaacgaggcctacgcgcgcgacaatcgttcgttcggcctg
accaccctgcgcaaccgccacgtggcgtcgttgcgcggcggccggttgtcgctgcgcttc
cgcggcaagggcgggctggagcacgcgatggtcgtcgacgatcagcgcctggcgcgcatc
gtggcgcgctgccaccagctgccggggcaactgctgttccagtacctggatgaggatggc
gtctgccagccggtcgattcggggcaggtcaacgcctatctgcgcgatgcgatgggggag
gatttcacggccaaggatttccggacctggggcggcacgctgctggcggtcgcggcgctg
gctcgcacgccgctgccggaccccggcgacgagcgcgcgctggcggccggcgctgccgcg
gtcgtgcgcgaggtggcggctgcgctgcgcaacacgccggccgtctgccgcacctcgtat
atcgatccgcgggtgttcgacgtctggcgcaggggccgcctgcaccggctggcgagccag
cacggcagcggcggcccgcgccggctggaagggctggccctgcgggtgctgcgcgaccgc
ccgggtgtcggagggcggccgagcggaacgccgcggcggcgcgcgcgctga
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