KEGG   Dokdonella koreensis: I596_2445
Entry
I596_2445         CDS       T04377                                 
Name
(GenBank) Putative DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dko  Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:dko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dko03032]
    I596_2445
   03400 DNA repair and recombination proteins [BR:dko03400]
    I596_2445
Enzymes [BR:dko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     I596_2445
DNA replication proteins [BR:dko03032]
 Prokaryotic type
  DNA Topoisomerases
   I596_2445
DNA repair and recombination proteins [BR:dko03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      I596_2445
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: ANB18453
UniProt: A0A160DWZ2
LinkDB
Position
complement(2810498..2811628)
AA seq 376 aa
MTTRRRDRKPPRRPPQDRAAQDEAAIAREAGLVHVRDDAPGIRRRRSGAGFIYLDADGTR
IRDAAQLARIRALAVPPAYTEVWICRDPRGHLQATGRDARRRKQYRYHARWRVFRDRSKF
VRLVAFGQALPRLRRRLRRDLALPGLPCEKVVAVVVSLLAETLARVGNEAYARDNRSFGL
TTLRNRHVASLRGGRLSLRFRGKGGLEHAMVVDDQRLARIVARCHQLPGQLLFQYLDEDG
VCQPVDSGQVNAYLRDAMGEDFTAKDFRTWGGTLLAVAALARTPLPDPGDERALAAGAAA
VVREVAAALRNTPAVCRTSYIDPRVFDVWRRGRLHRLASQHGSGGPRRLEGLALRVLRDR
PGVGGRPSGTPRRRAR
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgacgacccgccggcgtgaccgcaagccgccccgccgcccgccgcaggaccgggccgcc
caggacgaggccgccatcgcgcgcgaggccggcctggtccacgtgcgcgacgacgcgccc
ggtatccgccgccggcgcagcggggcgggcttcatctacctcgatgccgacggcacacgg
atccgcgacgccgcacagctggcgcgcatccgcgcgctggcggtgccgccggcctacacc
gaggtgtggatctgccgcgatccgcgcggccacctgcaggcgaccggccgcgacgcgcgg
cggcgcaagcagtatcgctaccacgcgcgctggcgcgtcttccgcgatcgcagcaagttc
gtgcgcctggtcgcgttcggacaggcgctgccccggctgcggcgacggctgcgccgcgac
ctggcgctgcccggcctgccgtgcgagaaggtcgtggcggtggtcgtctcgctcctggcc
gagaccctggcgcgggtcggcaacgaggcctacgcgcgcgacaatcgttcgttcggcctg
accaccctgcgcaaccgccacgtggcgtcgttgcgcggcggccggttgtcgctgcgcttc
cgcggcaagggcgggctggagcacgcgatggtcgtcgacgatcagcgcctggcgcgcatc
gtggcgcgctgccaccagctgccggggcaactgctgttccagtacctggatgaggatggc
gtctgccagccggtcgattcggggcaggtcaacgcctatctgcgcgatgcgatgggggag
gatttcacggccaaggatttccggacctggggcggcacgctgctggcggtcgcggcgctg
gctcgcacgccgctgccggaccccggcgacgagcgcgcgctggcggccggcgctgccgcg
gtcgtgcgcgaggtggcggctgcgctgcgcaacacgccggccgtctgccgcacctcgtat
atcgatccgcgggtgttcgacgtctggcgcaggggccgcctgcaccggctggcgagccag
cacggcagcggcggcccgcgccggctggaagggctggccctgcgggtgctgcgcgaccgc
ccgggtgtcggagggcggccgagcggaacgccgcggcggcgcgcgcgctga

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