Dokdonella koreensis: I596_2503
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Entry
I596_2503 CDS
T04377
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dko
Dokdonella koreensis
Pathway
dko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I596_2503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_2503
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I596_2503
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I596_2503
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
ANB18507
UniProt:
A0A160DVE3
LinkDB
All DBs
Position
complement(2873513..2875549)
Genome browser
AA seq
678 aa
AA seq
DB search
MTDRFQLVSPYRPAGDQPAAITKLIDGFEAGLARQTLLGVTGSGKTFTIANVVERVQKPT
LVLAPNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIE
QMRLSATKTLLSRSDALIVATVSAIYGLGDPEDYLSMRLILARGEHADQRKLIRHLTDLQ
YTRGDIELRRGTYRVRGDVIDVFPAESETEALRIELFDGDIENLSLFDPLTGELIRKVPR
YTVYPKTHYATTRDRVLHAIETVKLELADRLKYLYETNKLVEAQRLQQRTQFDLEMMAEV
GYCQGIENYSRHLTGRSAGEPPPTLFDYLPPDALLVVDESHVTIPQLGAMYKGDRSRKET
LVEFGFRLPSAMDNRPLRFEEWEARAPRTIFVSATPGPYERQHSDGNVVELVVRPTGLID
PAVEIRPARTQVDDLLSEANARIAMGDRVLVTTLTKRMAENLTEYLEEHGVRVRYLHSDI
ETVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADVITRSMQAAIDETDRRRGKQVEYNLAHGITPKSVERRIVDIMEGA
RADPDEGRSGKGRGRGAAAARKVAEQAEDYRSLSPDQVAARIKQLEARMYKHAQDLEFED
AARLRDQIHRLREQALIG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgcttccaactcgtctcgccctaccggcctgccggcgaccagcccgcggcg
atcacaaagctgatcgacggcttcgaggcgggcctggcgcgccagaccctgctgggcgtg
accggctcgggcaagacgttcacgatcgccaacgtcgtggagcgcgtccagaagccgacc
ctggtgctggcgccgaacaagacgctggccgcccagctctacggcgaattcaaggagttc
ttcccgcacaacgcggtcgagtacttcgtcagctactacgactactaccagcccgaggcc
tacgttccttccagcgatacctatatcgagaaggacgccagcatcaacgaccacatcgag
cagatgcgcctgtcggccaccaagacgctgctgtcgcggtccgacgcgctgatcgtggcg
acggtatcggcgatctacggcctcggcgatccggaagactacctgtcgatgcgcctgatc
ctggcgcgcggcgagcacgccgaccagcgcaagctgatccgccacctgacggacctgcag
tacacgcgcggcgacatcgagctgcgccgcggcacctaccgcgtgcgcggcgacgtcatc
gacgtgttcccggccgagtcggagaccgaggcgctgcgcatcgagttgttcgacggcgac
atcgagaacctctcgctgttcgatccgctgaccggcgagctgatccgcaaggtgccgcgc
tacacggtctaccccaagacccactacgccaccacgcgcgaccgcgtgctgcacgcgatc
gagacggtcaagctggaactggccgaccggctcaagtacctctacgagaccaacaagctg
gtcgaggcgcagcgcctgcagcagcgcacgcagttcgacctggagatgatggccgaggtc
ggctactgccagggcatcgagaactactcgcgccacctgaccggccgctcggccggcgag
ccgccgccgaccctgttcgactacctgccgcccgacgcgctgctggtggtggacgagtcg
cacgtgacgatcccgcagctcggcgcgatgtacaagggcgaccggtcgcgcaaggagacc
ctggtcgagttcggcttccggctgccatcggcgatggacaaccggccgctgcggttcgag
gagtgggaagcgcgcgcgccgcgcacgatcttcgtctcggccacgcccggcccctacgag
cggcagcactcggacggcaacgtcgtcgagctggtggtccgccccaccggcctgatcgac
cccgcggtcgagatccgccccgcgcgcacccaggtggacgacctgctgtcggaggccaac
gcgcgcatcgcgatgggtgaccgcgtgctggtgacgacgctgaccaagcgcatggccgaa
aacctcaccgagtacctggaagagcacggcgtgcgcgtgcgctacctgcactcggacatc
gagacggtcgagcgcgtggagatcatccgcgacctgcggctgggcaagttcgacgtgctg
gtgggcatcaacctgctgcgcgagggcctggacatgccggaggtctcgctggtcgcgatc
ctggacgcggacaaggaaggcttcctgcgctcgaccggctcgttgatccagacgatcggc
cgcgccgcgcgcaacctgcgcggcaaggcgatcctctacgccgacgtcatcacccggtcg
atgcaggcggcgatcgacgagaccgaccggcgccgcggcaagcaggtggagtacaacctg
gcgcacggcatcacgcccaagtcggtcgagcgccgcatcgtggacatcatggaaggcgcg
cgcgccgatccggacgaaggccgttccggcaaggggcgtggccgcggtgcggcggccgcg
cgcaaggtggccgagcaggccgaggactaccggtcgctgtcgccggaccaggtggcggcg
cgcatcaagcagctcgaagcgcgcatgtacaagcacgcccaggacctggagttcgaggac
gccgcccggctgcgcgaccagatccaccggctgcgcgagcaggcgctgatcggctga
DBGET
integrated database retrieval system
