Dokdonella koreensis: I596_3049
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Entry
I596_3049 CDS
T04377
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dko
Dokdonella koreensis
Pathway
dko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I596_3049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_3049
Enzymes [BR:
dko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I596_3049
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I596_3049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
A2L_zn_ribbon
zf-CHY
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ANB19041
UniProt:
A0A160DXK9
LinkDB
All DBs
Position
complement(3507874..3510081)
Genome browser
AA seq
735 aa
AA seq
DB search
MSDDLPAAPQAIVRVAVPVPLAQAFDYAVPAGVPIPARGCRVRVPFGRRDTVGVVVGHAE
AAAVAPGRLKPIGEVLDPAPWLTEELLGSLEWASRYYHHPLGEVLEAALPQALRSARTPP
TEDEEVWFLEDAGRQARENPGRRRGTRPDRLLDQLAEGAVAAALLDLRLPGWRAAARSLR
QRGWVGCRRVPVASAPPRPSPGPPLNTEQAAVVAAVAAEPDRFVPILLHGVTGSGKTEVY
LDLIGSCIARGRQALVLVPEIALTPQMLRRFRERLGVTIAVLHSGLGEVERARAWLAAAR
GDAPVVLGTRSAVFVPLPRPGLLVVDEEHDTSYKQQEGFRYHARDLALVRAKALQVPVVL
GSATPSLESLANAEAGRYRHLHLRQRAGSARPPDLHIVDLRRQPLQHGLAEPALAAIRAC
LDRGEQALVFRNRRGYAPVLQCRDCGWSAQCRRCDRPMTLHRGRSRLICHHCGAEQPVPP
GCPACGGLAIVPQGHGTERLEDVLRARFPDVPIVRIDRDTTRSRRARDALLDGLADEAPR
ILVGTQILAKGHDLARLSLVVLVSIDEGLFSVDFRAGERLGQLIVQVAGRAGRASRPGQV
WLQTHHPDHPLLATLRGGGYRALAQALLEERRQAQLPPYGYLALLRAEAEDPALLEQFLS
AACRVRPAPEGVRLQGPLSAPMPRRAGAHRGQVIVEADERGPLQGYLTSWLPQVAALPGG
RQLRWSIDVDPIDLF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatcttccggcagccccgcaggcgatcgttcgcgtcgcggttccggtaccc
ctcgcccaggccttcgactacgcggttcccgccggcgttccgatcccggcgcgcggctgc
cgggtgcgtgtcccgttcggtcgccgcgatacggtcggcgtcgtggtcggccatgccgag
gccgccgccgtcgccccgggccggctcaagccgatcggggaggtcctcgacccggcgccg
tggctgaccgaggaactgctcggcagcctcgaatgggcgtcgcgctactaccaccacccg
ctcggcgaggtcctggaggcggcgctgccgcaggccctgcgcagtgcgcggacgccgccc
accgaggatgaggaagtgtggttcctcgaggacgccggccgccaggcgcgcgagaatccc
gggcgccggcgtggcacccgccccgaccgcctgctcgaccagctcgccgaaggcgccgtc
gcggcggccctgctcgacctgcgcctgcccggctggcgggcagcggcgcgcagcctgcgc
cagcgcggctgggtcggctgccgtcgcgtgccggtcgccagtgcgccgccgcggccgagc
cccgggccacccctcaacaccgagcaggccgccgtggtcgccgcggtggcggccgagccg
gaccgcttcgtgccgatcctgctccacggtgtcaccggcagcggcaagaccgaggtctac
ctggacctgatcggcagctgcatcgcgcgcggccggcaggccctggtgctggtgccggag
atcgcgctgacgccgcagatgctgcggcggttccgcgagcggctgggcgtcacgatcgcg
gtcctgcactcgggcctgggcgaggtcgagcgtgcacgcgcctggctggcggccgcgcgc
ggcgacgcaccggtggtgctgggaacgcgttcggcggtcttcgtgccgctgccgcggccg
ggcctgctggtcgtggacgaggaacacgacacttcgtacaagcagcaggaaggcttccgc
taccacgcgcgcgacctggccctggtgcgcgccaaggccttgcaggtaccggtcgtgctc
ggatcggccacgccgtcgctcgaatcgctggccaatgccgaggcgggccgttaccggcac
ctgcacctgcggcagcgcgccggcagcgcgcggccgccggacctgcacatcgtggacctg
cgccggcagccgctgcagcacgggctggcggagccggcgctggcggccatccgcgcctgc
ctcgatcgcggcgaacaggcgctggtcttccgcaaccgccgcggctacgcaccggtgctg
caatgccgggactgcggctggagcgcgcagtgccggcgctgcgaccggccgatgacgctg
catcgcgggcgttcccggctgatctgccaccactgcggcgcggagcagccggtgccgccg
gggtgtccggcctgcggcgggctggcgatcgtgccgcagggacacggcaccgaacgcctg
gaagacgtgctgcgcgcgcgcttcccggacgtgccgatcgtgcggatcgaccgcgacacc
acacgcagccggcgcgcgcgcgatgccttgctcgacggcctcgccgacgaggcgccgcgc
atcctggtcggcacgcagatcctcgccaaagggcatgacctggcgcggttgagcctggtc
gtgctggtcagcatcgacgagggcctgttcagtgtggacttccgcgccggcgagcgcctc
ggccagctgatcgtccaggtggccggccgcgccggccgtgcatcgcggcccggccaggtc
tggttgcagacccatcatccggatcacccgctgctggcgaccttgcgcggcggcggctat
cgcgcgctggcgcaggccctgctggaggagcggcggcaggcacaactgccaccgtacggc
tatctggccttgctgcgtgccgaggcggaggacccggcgctcctggagcagttcctgtcc
gccgcctgccgcgtacggccggcaccggagggcgtccgcctgcaggggccgctgtcggca
ccgatgccgcggcgggccggcgcgcatcgcggccaggtcatcgtcgaggccgacgagcgc
gggccgctgcagggctacctgacgtcatggctgccgcaggtcgccgcgcttccgggcggg
cggcagctgcgctggtcgatcgacgtcgatccgatcgacctgttctga
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