Dokdonella koreensis: I596_3065
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Entry
I596_3065 CDS
T04377
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dko
Dokdonella koreensis
Pathway
dko00550
Peptidoglycan biosynthesis
dko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I596_3065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dko01002
]
I596_3065
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dko01011
]
I596_3065
Enzymes [BR:
dko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I596_3065
Peptidases and inhibitors [BR:
dko01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
I596_3065
Peptidoglycan biosynthesis and degradation proteins [BR:
dko01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
I596_3065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
DUF1381
Beta-lactamase
Transpeptidase
Tab2-like_C
Motif
Other DBs
NCBI-ProteinID:
ANB19057
UniProt:
A0A160DWP3
LinkDB
All DBs
Position
complement(3529307..3530614)
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AA seq
435 aa
AA seq
DB search
MKRIELRSAFLTPGRLPLLLTAVLCAATAGAQTPATSTPTPATPTPAPRPQPAAPAAAPA
NMPTPPPPAIEGTSWVLMDYATGQVLAESNGDLRVEPASITKVMTSYVVSAELALGKIKR
DDQVQISENAWRSGGAGTDGSTSFLVLNSQVPLDALLHGMIIQSGNDAAIALAEHTAGSE
PVFADLMNRYAAKLGLAGTHYVDASGLPHPDHYTTARDVALLSRALIRDFPEDYAIYAIK
DYEWNGIKQHNRNSLLWRDATVDGIKTGHTSSAGFCLVTSAKRGDQRLIAVVMGSSSEKR
RADDNQALLNYGFRFYEAHKLYEAGKPLAQPELWKGTTATLPLGVAEDVLVTMPRGRYDQ
LKASLELPSRVIAPLPKGQAVGTLKIELDGKTLLERPLVTLEDAPEGGFFKRLYDGVWLW
FKGDDGGKVSAAPDA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcgagcttcgttccgccttcctgactccgggccggctgcccctgctgttg
acggcggtgctgtgcgccgcgactgccggcgcgcagacgccggccacgtcgacgccgacg
ccggccacgccgacgcccgcgccgcggccgcagccggcagcgccggccgctgcgccggcc
aacatgccgaccccgccaccgccggcgatcgaaggcaccagctgggtgctgatggactac
gcgaccggccaggtgctggccgagtcgaacggcgacctgcgcgtggagccggcgtcgatc
accaaggtgatgacgtcctacgtcgtctcggccgagctggcgctgggcaagatcaagcgg
gatgaccaggtgcagatctcggagaacgcctggcggtccggcggcgcggggacggacggg
tccaccagcttcctggtgctcaacagccaggtgccgctcgatgcgctgctgcacggcatg
atcatccagtccggcaacgatgccgccatcgcgctggccgagcacacggccggctccgaa
ccggtgttcgccgacctgatgaaccgctacgcggcgaagctgggcctggccgggacgcac
tacgtcgatgccagcggcctgccgcatccggaccactacacgacggcgcgcgacgtggcg
ctgctttcgcgcgcgctgatccgcgacttccccgaggactacgcgatctacgcgatcaag
gactacgagtggaacggcatcaagcagcacaaccgcaattcgctgctctggcgcgacgcc
accgtggacggcatcaagaccgggcacaccagttccgcgggcttctgcctggtgacgtcg
gccaagcgcggcgaccagcggttgatcgcggtggtgatgggctcgtccagcgagaagcgc
cgggccgacgacaaccaggcgctgctcaactacggtttccgcttctacgaggcgcacaag
ctctacgaggccggcaagccgctggcccagccggagctgtggaagggcaccacggccacg
ctgccgctgggggtcgccgaggacgtgctggtgacgatgccgcgcgggcgctacgaccag
ctcaaggccagcctcgaactgccttcgcgggtgatcgcgccactgccgaagggacaggcc
gtgggcaccttgaaaatcgagctcgacggcaagaccttgctggagcgcccgctggtcacg
ctcgaggacgcgccggaaggcgggttcttcaagcgtctctacgacggcgtatggctctgg
ttcaagggggacgacggcggcaaggtgtcggccgctcccgatgcatga
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