Dokdonella koreensis: I596_3447
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Entry
I596_3447 CDS
T04377
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dko
Dokdonella koreensis
Pathway
dko03420
Nucleotide excision repair
dko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I596_3447
03430 Mismatch repair
I596_3447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_3447
Enzymes [BR:
dko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I596_3447
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I596_3447
MMR (mismatch excision repair)
Other MMR factors
I596_3447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ANB19435
UniProt:
A0A160DXI4
LinkDB
All DBs
Position
3951966..3954140
Genome browser
AA seq
724 aa
AA seq
DB search
MSTPAGHCLVLAGAGSGKTRVLTHRIGWLLEVERVSPWSILAVTFTNKAAGEMRTRTEGL
VGNDARGLTIGTFHGIAHRLLRRHWREAGLPETFQILDADDQQRLVKRTIQGLGLDEARF
PPRQAAWFINGAKDEGRRPDAIAADGNPLAQTLVDIYRAYENACRRAGLVDFAELLLRAH
ELWLNDDALLAHYRERWRHLLIDEFQDTNTLQYAWIRVLAGTTAQVFVVGDDDQAIYGWR
GARVENVQHFLRDFPDAATIRLEQNYRSTSNILGAANAVIANNRDRLGKQLWTAGPAGAP
IEVYAAYNEQDEARYVVDRIGEHIDGGGSAADVAVLYRSNAQSRNFEEHLIQRDIPYRVY
GGLRYFERAEIKDALAYLRLLANRHDDAAFERVVNTPPRGIGDRTVDALRRRARRDDASL
WEASLAELAGAELAGRAKNALRAFLELIDALARECLSPEAAGDVPADAVIDEPLSLQKQV
ELAIGRTGLRDFYESDSRGGAESRVENLDELVNVADRFEPTPEDVEAGLSRLGAFLAHAA
LEAGEGQGEAWQSCVQLMTLHSAKGLEFPLVFLVGLEDGLFPSQKSMEEPGRLAEERRLA
YVGITRARERLVLTYAESRRLHGMEMYGRPSRFLAEIPRELLHEVRPRVQVSRPVFAGPR
ALAAEPDAQGLSLGQRVRHETFGEGVVVDFEGSGNHMRVQVNFEDSGQKWLVLAYARLSP
LNGA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgccggcgggccactgcctcgtgctggcgggtgccggctccggcaagacccgg
gtactcacgcaccgcatcggctggctgctcgaggtcgaacgcgtctcgccctggtcgatc
ctcgcggtgaccttcaccaacaaggccgccggcgagatgcgcacgcggaccgaggggctg
gtcggcaacgacgcccgcgggctgacgatcggcacgttccacggcatcgcccaccggctg
ctgcgccgccactggcgcgaggcgggcctgcccgagacgttccagatcctggacgccgac
gaccagcagcggctggtcaagcgcacgatccagggactcgggctggacgaggcacgcttt
ccgccacgccaggccgcctggttcatcaacggcgccaaggacgaaggccggcgtcccgac
gcgatcgccgccgacggcaatccgctggcccagaccctggtcgacatctaccgcgcctac
gagaacgcctgccgccgcgccggtctcgtcgacttcgccgagctgctgctgcgcgcccac
gagctgtggctcaacgacgacgccctgctcgcgcactaccgggagcgctggcggcacctg
ttgatcgacgagttccaggacaccaacacgctgcagtacgcctggatccgcgtgctggcc
ggaacgaccgcccaggtgttcgtggtcggcgacgacgaccaggcgatctacggttggcgc
ggtgcgcgcgtggagaacgtgcagcatttcctgcgcgacttccccgatgcggccacgatc
cggctcgaacagaactaccgctcgacctccaacatcctcggcgccgccaatgccgtgatc
gcgaacaaccgcgaccgcctcggcaagcagctgtggacggcgggcccggccggcgcgccg
atcgaggtctacgcggcgtacaacgaacaggacgaggcccgctatgtggtcgaccgcatc
ggcgagcacatcgacggcggtggatcggcggcggacgtggccgtgctctatcgatccaac
gcgcaatcgcgcaacttcgaagagcacctgatccagcgcgacattccgtatcgcgtctac
ggcggcctgcgctacttcgaacgcgccgagatcaaggacgcgctggcgtacctgcgcctg
ctcgccaatcgccacgacgatgcggcgttcgagcgcgtcgtcaacacgccgccccgcggc
atcggcgaccgcacggtcgatgcactgcggcggcgtgcgcgccgggacgacgcctcgctg
tgggaggcctctctggcggagcttgccggcgcggagctggccggccgcgcgaagaacgcg
ctgcgcgcattcctggagctgatcgatgcgctggcgcgcgaatgcctgagtccggaggcg
gcaggtgacgtcccggccgatgccgtgatcgacgagccgctgtcgctgcaaaagcaggtc
gagctcgcgatcgggcgcaccggcctgcgcgacttctacgaatcggactcgcgcggcggt
gccgaatcgcgcgtcgaaaacctcgacgaactcgtcaacgtcgccgaccggttcgagccg
acgcccgaggacgtagaggcgggattgtcgcgcctcggcgccttcctggcccatgccgcg
ctcgaagcgggcgaaggccagggggaagcctggcaatcgtgcgtccagctgatgacgctg
cactcggccaagggcctggagtttccgctggtcttcctggtggggctcgaggacgggctg
tttccgagccagaagtcgatggaggaacccggccgcctggccgaggagcggcggctggcc
tatgtcggcatcacgcgggcacgcgagcgcctggtgctgacctacgccgaatcacgccgc
ctgcacggcatggagatgtacggccggccgtcgcgtttcctggccgagatcccgcgcgag
ctgctgcacgaggtgcgtccccgggtgcaggtcagccggccggtgttcgccggaccgcgt
gccctggcggccgaaccggacgcccagggcctttccctgggccagcgcgtccgccacgag
accttcggggaaggcgtcgtcgtcgacttcgaaggcagcggcaaccacatgcgtgtgcag
gtcaatttcgaggacagcggacagaagtggctggtgctcgcctacgcccggctttcgcct
ctgaacggcgcgtga
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