Dokdonella koreensis: I596_3785
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Entry
I596_3785 CDS
T04377
Name
(GenBank) Cystathionine beta-lyase/cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dko
Dokdonella koreensis
Pathway
dko00260
Glycine, serine and threonine metabolism
dko00270
Cysteine and methionine metabolism
dko00450
Selenocompound metabolism
dko00670
One carbon pool by folate
dko01100
Metabolic pathways
dko01110
Biosynthesis of secondary metabolites
dko01230
Biosynthesis of amino acids
Module
dko_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I596_3785
00270 Cysteine and methionine metabolism
I596_3785
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
I596_3785
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I596_3785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dko04147
]
I596_3785
Enzymes [BR:
dko01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
I596_3785
Exosome [BR:
dko04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
I596_3785
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ANB19768
UniProt:
A0A167HBA9
LinkDB
All DBs
Position
complement(4372905..4374065)
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AA seq
386 aa
AA seq
DB search
MKNKRRSAIGTRAIHAGQSPDPSTGAIMVPIYATSTYVQDSPGVHKGYEYSRTQNPTRMA
YERCVADLEGGRQGYAFASGLAAAATVLDLLDSGSHVIAMDDLYGGSYRLFERVRRRSAG
LDFSFVDLADPKVLAAALKPNTRMIWVETPTNPMLKLVDLDRVAAFARKHGLILVVDNTF
SSPILQRPLERGAHLVLHSATKYLNGHSDIVGGIVVAGDDPALAEQMAFLHNSVGAVAGP
FDAFLALRGLKTLHLRMRAHCENALALAQWLEKHPAIERVIYPGLASHPQHRLARRQMDG
YGGIVTIEVKGGLRKARRMLERCHLFALAESLGGVESLVDHPAIMTHASIPPAQRKKLGI
SDGLVRLSVGVEDLADLRDELAAALG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaacgccgttccgccatcggcacccgcgcgatccacgcaggccaaagcccc
gatccgtcgaccggcgcgatcatggtgccgatctacgccacctcgacctacgtccaggac
agcccgggcgtgcacaagggctacgagtactcgcgcacgcagaaccccacccgcatggcg
tacgagcgctgcgtggcggacctggagggtggccgccagggctatgcgttcgcgtcgggg
ctggcggccgcggccacggtgctggacctgctcgacagcggcagccacgtcatcgcgatg
gacgatctgtacggcggcagctaccgcctgttcgagcgcgtgcgacgccggtcggccggg
ctcgacttcagcttcgtcgatctcgcagacccgaaggtgctggccgcggcgctcaagccc
aacacgcggatgatctgggtggagacgccgaccaatccgatgctcaagctggtcgatctg
gaccgggttgcggcgttcgcgcgcaagcacggcctgatcctggtcgtggacaacacgttt
tcgtcgccgatcctgcagcggccgctcgaacggggtgcccacctggtgctgcattcggcc
accaagtacctcaacggccactcggacatcgtcggcggcatcgtcgtcgccggcgacgat
ccggcgctcgccgagcagatggcgttcctgcacaactcggtcggggccgtggccggcccg
ttcgacgcattcctcgccctgcgtggcctgaagacgctgcacctgcgcatgcgcgcgcac
tgcgagaacgcgctggcgctcgcccagtggctggaaaagcacccggcgatcgagcgcgtg
atctatccgggcctggcgtcgcatccgcagcaccggctggcacggcgccagatggacggc
tacggcggcatcgtcacgatcgaggtcaagggcggcctgcgcaaggcgcggcggatgctg
gagcgctgccacctgttcgcgctggccgaatcgctcggcggcgtcgagagcctggtcgac
cacccggcgatcatgacccacgcgtcgattccgcccgcgcagcgcaagaagctcggcatc
agcgacggcctggtgcgcctgtcggtcggcgtggaggatctggccgacctgcgtgacgag
cttgcggccgcgctgggctga
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