Dokdonella koreensis: I596_3819
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Entry
I596_3819 CDS
T04377
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
dko
Dokdonella koreensis
Pathway
dko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I596_3819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dko03400
]
I596_3819
DNA repair and recombination proteins [BR:
dko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I596_3819
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_27
TMP_4
Motif
Other DBs
NCBI-ProteinID:
ANB19802
UniProt:
A0A167HC87
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Position
complement(4421286..4422359)
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AA seq
357 aa
AA seq
DB search
MHLEELRLVDLRRFERLDLPLDPGWNQFVGGNGAGKTTVLEAAYLLSHGRTFRSGGRDGL
VRQGAAGFSVFGVTVQRDGRSSRVGLARTAGRLEARLDGSATTLGDLVEHAAVVCFEPGS
HALIAGGAEYRRAYLDWGVFHVEHMFLAQWRRYQRALRQRNASLRLGARDDELAAWEQEM
AASGAAITQLRGVYLDRLRPHLEVVAAAFLGELGQVSLDFHAGWAADLSLADSLAAGRLR
DRERGHTRGGPHRADLALRFERAERREYFSRGQEKLCALVCILAQARLFHAQAGHWPIIC
LDDLASELDVAHQQAVLGFLAGTDAQILLTGTAALAVPAGRAAAMFHVEQGRVERLL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttgaagaactgagactggtggacctgcgccgcttcgagcgcctggacctgccg
ctggaccccggctggaaccagttcgtcgggggcaacggggcaggcaagaccacggtgctc
gaagcggcctacctgctttcgcacgggcggaccttccgctcgggcgggcgcgatggtctg
gtccggcaaggggcggcgggcttctcggtcttcggcgtgacggtgcaacgggacggccgc
tcatcgcgcgtgggactggcacgaaccgcaggcaggctcgaagcgcggctggacggatcg
gcgacgacgctaggtgatctggtcgagcatgccgcggtcgtgtgcttcgaaccgggttcg
cacgcgctgattgccggcggcgcagagtaccggcgtgcgtacctggattggggtgtgttc
cacgtggaacacatgttcctggcgcagtggcggcgctaccagcgcgcgctgcggcagcgc
aatgcatcgctgcgcctgggggcacgtgacgatgagcttgcggcctgggaacaggagatg
gccgcatccggagcggcgataacccagctgcgcggcgtttatctggaccgtttgcgcccc
catctggaggtggtcgccgccgccttcctcggtgaactgggccaggtcagcctggatttc
catgcgggttgggcggcggacctgtccctggccgacagcctcgcggcgggccggctgcgt
gatcgcgagcgcggccatacgcggggagggccgcatcgtgcggatctggcactgcgtttc
gagcgggccgagcgacgcgagtacttctcgcgcggccaggagaagctctgcgcgctggtc
tgcatcctggcacaggcgcgcctgtttcatgcccaggccggccattggccgatcatctgc
ctggatgacctggcgtcggagctcgatgtcgcgcaccagcaggccgtactcgggttcctg
gccggtaccgatgcacagatcctgctgaccggtaccgccgcgctggccgtgcccgccggt
cgcgcggcggcgatgttccacgtggaacagggcagggtcgagcgactgctataa
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