Dokdonella koreensis: I596_465
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Entry
I596_465 CDS
T04377
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dko03009
]
I596_465
Enzymes [BR:
dko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
I596_465
Ribosome biogenesis [BR:
dko03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
I596_465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltr_RsmF_N
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ANB16502
UniProt:
A0A167GFK1
LinkDB
All DBs
Position
560701..562008
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AA seq
435 aa
AA seq
DB search
MSAGAALRAEAARALARVALDGASLRVELAATAARVADPRDRALLAALLFEASRGWLRWD
AAVGTMLEKPLPARARELRALLVLGVVQLAVLALPAYAVVAACVDAARVLGQPRHAGLVN
ALLRRFLRERAAIEARLDRDPVTRHAHPRWLIDAIGRDWPDQAEAILAANNRQAPLTLRA
NRRRVEPAALLARLAEAGIAAERQADLAESLLLDQSQDVTRLPGYAEGLFSVQDGAAQRV
ADLLDLRDGLRVLDACAAPGGKAAHVLERATVDLLALDRDPARLPRIADNLARLGLAATV
RAGDATTPAAWWDGQAFDRILVDAPCSATGIVRRQPDIKLHRRAADVAPLTAIQLGLLEA
LWPLLAPGGRLVYATCSMLRAENETVLAQFLDRHDNAKALPVPERFGVAAGVGRQNLPGA
DGMDGFFYAAVEKHR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccggcgccgcgttgcgcgcggaggcggcgcgggccctggcgcgggtcgcgctg
gacggtgcctcattgcgggtcgagctggccgcgacggctgcgcgggtcgccgacccgcgc
gatcgcgcgctgctggccgcgctgctgttcgaggcgtcccgcggctggctgcgctgggat
gccgccgtcggcacgatgctcgagaagccgctgccggccagggcacgcgagctgcgcgcg
ctgctggtgctcggggtggtccaactggcggtgctggcgctgccggcctatgccgtggtc
gccgcctgcgtcgatgccgcccgcgtgctcgggcagccgcgccatgccgggctggtcaat
gccctgctgcgacgcttcctgcgcgagcgtgcggcgatcgaggcccggctcgatcgcgat
ccggtgacgcgccatgcgcatccgcgctggctgatcgacgcgatcgggcgtgactggccg
gaccaggccgaggcgatcctcgccgccaacaaccggcaggcgccgctgacgctgcgcgcc
aaccgccgacgcgtcgagcccgctgcgctgctggcgcgtcttgccgaggccggcatcgcc
gccgagcggcaggcggacctcgccgagagcctgctgctggaccagagccaggacgtgacg
cggctgcccggctacgccgagggcctgttctcggtgcaggacggcgccgcacagcgggtg
gccgatctgctcgacctgcgcgacggcctgcgcgtgctcgatgcctgcgccgcaccgggc
ggcaaggccgcacacgtgctcgagcgcgccaccgtcgacctgctcgcgctggaccgcgat
ccggcgcgcctgccgcggatcgcggacaacctggcgcggctcgggctggcggccaccgtg
cgcgccggcgacgccaccacgcccgcggcgtggtgggacggccaggcgttcgaccgcatc
ctggtcgacgcgccgtgctcggcgaccggcatcgtccgccgccagccggacatcaagctg
caccggcgggcggccgacgtcgcaccgctgacggcgatccagctcggactgctcgaggcg
ctgtggccgttgctggcgcccggcgggcgcctggtctacgcaacctgctcgatgctgcgc
gccgagaacgaaaccgtactggcgcaattcctggaccgccacgacaatgcgaaggcactg
ccggtcccggaacgcttcggcgtcgctgccggcgtggggcggcagaacctgccgggggcg
gacggcatggacggtttcttctatgcggcggtcgagaaacatcgttag
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