Dokdonella koreensis: I596_502
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Entry
I596_502 CDS
T04377
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dko03009
]
I596_502
Enzymes [BR:
dko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I596_502
Ribosome biogenesis [BR:
dko03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I596_502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
Methyltransf_25
TRM5-TYW2_MTfase
RrnaAD
Methyltr_RsmB-F
MTS
Methyltransf_15
PabTrmU54_TRAM_dom
Methyltransf_23
Cons_hypoth95
Methyltransf_11
Methyltransf_ANTKMT
Bd3614-deam
Motif
Other DBs
NCBI-ProteinID:
ANB16539
UniProt:
A0A167GGR9
LinkDB
All DBs
Position
605778..607076
Genome browser
AA seq
432 aa
AA seq
DB search
MQPLAEVDITDLSHDGRGVARLHDKAVFVAGALPGERARIRIVRRHRSFDEAKVEELLVR
SAERIEPRCVHFGTCGGCALQHLPTDRQIAAKQRVLAENFERIGKVAPRTWLEPLTDAPW
GYRRKGRLSVKWVEKKGKVLVGFREEDPRFVADLSVCHTLLPQVGERIGALSELIAGLDA
KREIAQIEIAADDRTTALVFRHLVPLGDEDRARLVAFGRTHDLAILLQPKGPDSVQALEP
ERIDLRFRIPAADVELMFRPLDFIQVNAGMNQRMLAQALDLLDLREDDRVLDLFCGLGNF
TLPIARWAGSVVGVEGEAGLVARAGDNARHNGIDNAVFHAADLAQDQRAAGWAKAGYDKL
LLDPPRSGAAAVLDYLPRKGTDRVVYVSCHPGSLARDAGILVERHGFRLSTAGVMDMFPH
TAHVESIALFER
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgctagccgaagtcgatatcaccgatctgtcccatgatggccgcggggtcgcc
cgcctccacgacaaggccgttttcgtcgccggcgcgctgccgggcgagcgcgcacgcatc
cgcatcgtgcgaaggcatcgcagcttcgacgaggccaaggtcgaggagctgctggtgcgc
tcggccgagcgcatcgagccgcgctgcgtgcacttcggcacctgtggaggctgcgccttg
cagcacctgccgacggaccggcagatcgccgccaagcagcgcgtgctggccgagaatttc
gagcggatcggcaaggtggccccgcggacctggctggaaccgctgaccgacgcaccctgg
ggctaccggcgcaagggccggctttcggtcaagtgggtcgaaaaaaagggcaaggtgctg
gtcggcttccgcgaggaggacccgcgcttcgtcgccgatctttcggtctgccatacgctg
ctgccgcaggtgggcgaacggatcggagccttgagcgaactgatcgccggtctcgacgcc
aagcgcgagatcgcgcagatcgagatcgccgccgacgaccggacgacggcactggtgttc
cggcacctggtgccgctcggcgacgaggatcgcgcccggctggtcgcgttcgggcgcacc
cacgacctggcgatcctgctgcagcccaaggggcccgacagcgtccaggcactcgaaccg
gagcggatcgacctgcgcttccgcatcccggcggcggacgtcgagctgatgttccggccg
ctcgacttcatccaggtcaacgccggcatgaaccagcgcatgctcgcgcaggcgctggac
ctgctcgacctgcgcgaggacgatcgcgtactggacctgttctgcggcctcggcaatttc
acgctgccgatcgcgcggtgggccggcagtgtcgtcggtgtcgagggcgaggccggcctg
gtcgcgcgtgccggtgacaacgcgcgccacaacggcatcgacaacgcggtgttccatgcc
gccgatctcgcgcaggaccagcgcgccgccggctgggccaaggccggctacgacaagctg
ctgctcgatccgccgcgatcgggcgccgccgcggtgctcgactacctgccgcgcaagggc
accgatcgcgtcgtctacgtgtcctgccatcccggctcgctcgcgcgcgatgccggtatc
ctggtcgagcgccacggcttccgcctcagcacggccggcgtcatggacatgtttccgcat
acggcgcacgtcgaatcgatcgccttgttcgagcgctga
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