Dokdonella koreensis: I596_630
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Entry
I596_630 CDS
T04377
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dko
Dokdonella koreensis
Pathway
dko00260
Glycine, serine and threonine metabolism
dko00460
Cyanoamino acid metabolism
dko00630
Glyoxylate and dicarboxylate metabolism
dko00670
One carbon pool by folate
dko00680
Methane metabolism
dko01100
Metabolic pathways
dko01110
Biosynthesis of secondary metabolites
dko01120
Microbial metabolism in diverse environments
dko01200
Carbon metabolism
dko01230
Biosynthesis of amino acids
dko01240
Biosynthesis of cofactors
dko04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I596_630
09102 Energy metabolism
00680 Methane metabolism
I596_630
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I596_630
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I596_630
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I596_630
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I596_630
Enzymes [BR:
dko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I596_630
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ANB16666
UniProt:
A0A167GKN6
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All DBs
Position
760224..761477
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AA seq
417 aa
AA seq
DB search
MFAKDLAIAGFDPELAGAIRAEASRQETHVELIASENYASPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEFVDIAEKLAIGRVKELFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNISGKLFNAIQYGVDAEGRIDYDAVERLAVEHQPKMIVGGFSAYSQV
VDWARLRAIADRVGAILFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLRGPRGGIIV
AKGLGEDLEKKLQSIVFPGIQGGPLMHVIAAKAVAFLEALQPEFKTYQQQVVVNAKAMAR
TLIARGYKIVSGGTENHLMLIDLIGRDVTGKDAEAALGRAHITVNKNAVPNDPRSPFVTS
GLRIGTPAITTRGYGEAESVALAGWIADVLDAPGDEAVIAAVRERVTAQCKAFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaggatctcgcgatcgccggtttcgacccggaacttgccggcgccatccgc
gccgaagcctcccgccaggagacccatgtcgagctgatcgcttcggagaactatgccagc
ccgcgcgtgctggaggcgcagggcagcgtgctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgaattcgtcgacatcgccgagaagctggcgatcggc
cgcgtcaaggagctgttcggcgccgactacgccaatgtccagccgcactcgggctcgcag
gccaaccaggccgtgtacctggcgctgctacagccgggcgacacgatcctcggcatgagc
ctcgcgcacggcggccacctgacgcacggcgccaaggtcaacatctccggcaagctgttc
aacgcgatccagtacggcgtcgatgccgagggccggatcgactacgacgccgtcgagcgc
ctggcggtcgagcaccagccgaagatgatcgtcggcggcttcagcgcgtattcgcaggtc
gtggactgggcgcggctgcgcgcgatcgccgatcgcgtcggcgcgatcctgttcgtcgac
atggcgcacgtggccggcctgatcgccgccggcgtctaccccaatccggtgccgcacgcg
cacgtggtgacctcgaccacccacaagacgctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcctgggcgaggacctggagaagaagctgcagtcgatcgtgttcccgggcatc
cagggcggtccgctgatgcacgtcatcgccgccaaggcggtggccttcctcgaagcgctg
cagccggagttcaagacctaccagcagcaggtggtcgtcaacgccaaggcgatggccagg
accctgatcgcgcgcggctacaagatcgtctcgggcggcaccgagaaccacctgatgctg
atcgacctgatcggccgcgacgtgaccggcaaggacgccgaggccgcgctcggccgcgcg
cacatcaccgtcaacaagaacgccgttcccaacgacccgcgctcgccgttcgtgacctcc
gggctgcgcatcggcacgccggcgatcaccacccgcggctacggcgaggccgagagcgtc
gccctggccggctggatcgccgacgtgctggacgccccgggcgacgaggcggtgatcgcc
gccgtgcgcgagcgggtcaccgcccagtgcaaggcgttccccgtctacggctga
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