Dokdonella koreensis: I596_722
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Entry
I596_722 CDS
T04377
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dko03009
]
I596_722
Enzymes [BR:
dko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I596_722
Ribosome biogenesis [BR:
dko03009
]
Prokaryotic type
rRNA helicases
I596_722
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_22
CMS1
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ANB16758
UniProt:
A0A160DRJ2
LinkDB
All DBs
Position
complement(854357..855721)
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AA seq
454 aa
AA seq
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MTDFSTLPLPPALQQALAALDYAQMTPVQAQSLPAILEGRDAIVQARTGSGKTAAFGLGL
LAAVDPAITAVQALVLCPTRELADQVSKEIRRLARFIPNLKLLTLCGGIPLRPQLASLTH
APHVVVGTPGRIQELIDAGALLLDGVRVLVLDEADRMLDMGFLDAINAIAVSLPRQRRTL
LFSATLPPPIRTISEHLQRDPAEVTVTDADDTIEQRFHEIDATRRFEALVQVLGAQRPAS
VLVFCNTRRDTEDVAERLRGLGHSALALHGDLEQREREDILVRFANRSCVILAATDVAAR
GLDIDDLPLVVSYDLASDADSHVHRIGRTGRAGRSGLAISLVAPAQMPRIGAIEARQGAR
VRWTPLPAATAAAPLRATMRTLCIDAGRQDKLRPGDVVGALTGDAGLDAEVIGKIAVFAT
RTCVAIRADTAATALQRLRAGRIKGRSFRVRTLD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttctcgacactgcccctcccgcctgcgttgcagcaggccctcgccgcactc
gactacgcgcagatgacgccggtgcaggcacaaagcctgccggccatcctggaagggcgc
gacgcgatcgtccaggcgcgcaccggcagcggcaagaccgccgccttcggcctgggcctg
ctggccgccgtcgaccccgccatcaccgccgtgcaggcgctggtgctctgccccacgcgc
gagctggcggatcaggtcagcaaggaaatccgccgcctggcccgcttcatccccaacctc
aagctgctgaccctgtgcggcggcattccgctgcggccgcagctggcctcgctgacccat
gcaccgcatgtcgtcgtcggcacgcccggacgcatccaggaactgatcgacgccggcgcc
ctgctgctggacggcgtgcgcgtgctggtgctggacgaagccgaccgcatgctcgacatg
ggcttcctcgacgcgatcaacgccatcgccgtcagcctgccgcggcagcgccgcacgctg
ctgttctcggccaccctgccgccgccgatccgcacgatcagcgagcacctgcagcgcgac
ccggccgaagtcacggtcaccgatgccgacgacacgatcgagcagcgcttccacgagatc
gacgcgacccgccgcttcgaggccctggtccaggtgctcggcgcgcagcgcccggcgtcc
gtgctggtgttctgcaatacccgccgcgacaccgaggacgtcgccgaacggctgcgtggc
ctgggccacagcgcgctggcgctgcacggcgacctggaacagcgcgaacgcgaggacatc
ctggtgcggttcgccaaccgcagctgcgtgatcctggccgccaccgatgtcgccgcgcgc
gggctggacatcgacgacctgccgctggtggtcagctacgacctcgcctccgacgccgac
agccacgtccaccggatcggccgcaccgggcgcgccggccgcagcgggctcgccatcagc
ctggtggcgcccgcgcagatgccgcgcatcggcgcgatcgaggcacgccagggcgcgcgc
gtgcgctggacgccgttgccggccgcaacggccgccgcaccgctgcgggcgacgatgcgg
acgctgtgcatcgacgccggccgccaggacaagctgcgtcccggcgacgtcgtcggcgcc
ctgaccggcgatgccggcctggacgccgaggtgatcgggaagatcgcggtgttcgcgacg
cgcacctgcgtggcgatccgtgccgataccgccgccaccgccctgcagcgcctgcgcgcc
gggcgcatcaagggccgcagcttccgggtgcgcacgctggactga
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