Dokdonella koreensis: I596_984
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Entry
I596_984 CDS
T04377
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dko
Dokdonella koreensis
Brite
KEGG Orthology (KO) [BR:
dko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dko03000
]
I596_984
Transcription factors [BR:
dko03000
]
Prokaryotic type
Helix-turn-helix
Other families
I596_984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
AAA_lid_14
Sigma54_activ_2
HTH_30
AAA_5
HTH_23
HTH_1
HTH_28
HTH_Tnp_ISL3
HTH_IclR
HTH_29
HTH_7
HTH_22
AAA
HTH_20
Mg_chelatase
HTH_psq
HTH_Tnp_1
AAA_16
PAS_8
HTH_17
AAA_2
PAS
PAS_9
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ANB17014
UniProt:
A0A160DSF4
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Position
1170830..1172680
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AA seq
616 aa
AA seq
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MKRMPTTGSVDAARRRFFDAGTLPHGLVSELILQSWRRCREHGLSVDERLRIEPASGSAL
GELKERFERLQRLCRPEIESLYADARATGSIVVLTAPDGVILDALGSADFLDKASRVALR
PGAPWGETSIGTNAIGTAVVERRAVEVRGGEHYFPPHRMLSCAAAPIFDPTGQLAGVLDL
SGEASVHHTHALGMVRFAVEQIEHRLFMHTFGAGTVLRLHAEPGLIGTPREGLLAFEGDR
IVGANRHALALTGLSWDELGRRRYADLFTSPLPRGEDVVELRNHLGTSLYARGRVAAPPR
SAPASVAAPGPARGATAPAPVFDAEQRHALDTAVRLLDADLPFALIGETGTGKEVFAREI
HRRSRRGSGRLVAVNCAAFPEGLIEAELFGYVGGAFTGARREGAAGLLREAHGGVLFLDE
IGDMPLTLQSRFLRVLQERAVAPLGGGPAVPVDFSIICATHRDLEAEVAAGRFRADLYFR
IAQHVVRLRPVRALDDRAGLIRHLWRALGGEAAGLAIGAEAMAVLCAAPWPGNYRQLAGT
LRALCVLAPAPVIGVEHLPAELRRVGAPPPVAADEGLQAIAESAMRRALAECDGNVSAAA
RRLGVSRSTLYRRLRP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatgcccaccaccggttccgtcgatgccgcacgccgtcgtttcttcgacgcc
ggcacgctgccgcatggcctcgtgtcggagctgatcctgcagtcgtggcggcgctgccgc
gagcacggcctgtcggtggacgagcgcctgcgcatcgagccggccagcggctcggcgctc
ggcgagctcaaggagcgtttcgagcggctgcagcgcctgtgccggccggagatcgagtcg
ctctacgccgatgcgcgcgccaccggcagcatcgtcgtgctgaccgcgcccgatggcgtg
atcctcgacgcgctcggcagcgccgacttcctcgacaaggcatcgcgcgtcgcgctgcgt
cccggcgcgccgtggggcgagacctcgatcggcaccaacgcgatcggcaccgccgtggtg
gaacgccgcgcggtcgaggtgcgcggcggcgagcactacttcccgccgcaccgcatgctg
agctgtgcggcggcaccgatcttcgatcccaccggccagcttgccggcgtactcgacctc
tccggcgaggcctcggtgcaccacacccacgcgctgggcatggtgcgtttcgcggtcgag
cagatcgagcaccggctgttcatgcacaccttcggcgccggcacggtgctgcgcctgcac
gccgagcccggcctgatcggcacgccgcgcgagggcctgctggcgttcgagggcgaccgc
atcgtcggtgccaaccggcacgcgctggcgctgaccggcctgtcctgggacgagctcggc
cggcgccgctacgcggacctgttcacctcgccgctgccgcgcggcgaggacgtggtcgag
ctgcgcaatcacctgggcaccagtctctacgcgcgcggccgggtggcggcgccgccgcgg
tccgcaccggcatcggtggcggcgcccggtccggcccgcggtgccacggcgccggcgccg
gtcttcgacgccgagcagcggcacgcgctcgacaccgcagtgcgcctgctcgacgctgac
ctgccgttcgcgctgatcggcgagaccggcaccggcaaggaggtgttcgcgcgcgagatc
caccggcgcagccggcgcggcagcgggcggctggtcgcggtcaattgcgccgcctttccc
gaaggcctgatcgaggcggaactgttcggctatgtcggcggcgccttcaccggcgcgcgc
cgcgagggcgccgccggcctgctgcgcgaggcgcacggcggcgtgctgttcctcgacgag
atcggcgacatgccgctgacgttgcagagccgcttcctgcgcgtgctgcaggagcgcgcg
gtggcaccgctcggcggcggaccggcggtaccggtcgatttctcgatcatctgcgcgacc
catcgcgacctggaagcggaggtcgcggccggccgtttccgcgccgacctctacttccgc
atcgcccagcacgtggtccggctgcggccggtgcgcgcgctcgacgaccgggccggcctg
atccgccatctctggcgcgcgctcggcggcgaggctgccggcctcgcgatcggtgcggag
gcgatggccgtgctctgcgccgcgccctggcccggcaactaccgccagctggccggcacg
ctgcgcgcgctgtgcgtgctggcgccggcaccggtgatcggcgtcgagcacctgccggcg
gaactgcgccgcgtcggcgcaccgccgccggtggcggccgacgagggcctgcaggcgatc
gccgagtcggcgatgcgccgcgccctggccgaatgcgacggcaacgtctcggcggcggca
cgccggctgggtgtcagccgcagcacgttgtaccgccgcctgcggccgtga
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