Desulfofundulus kuznetsovii: Desku_0006
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Entry
Desku_0006 CDS
T01499
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dku03032
]
Desku_0006
03400 DNA repair and recombination proteins [BR:
dku03400
]
Desku_0006
Enzymes [BR:
dku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Desku_0006
DNA replication proteins [BR:
dku03032
]
Prokaryotic type
DNA Topoisomerases
Desku_0006
DNA repair and recombination proteins [BR:
dku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desku_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ANTAR
CENPH
Motif
Other DBs
NCBI-ProteinID:
AEG13656
UniProt:
A0AAU8PA44
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All DBs
Position
6060..8486
Genome browser
AA seq
808 aa
AA seq
DB search
MSVNIGKVIPIDINEEMKHSYLDYAMSVIVGRALPDVRDGLKPVHRRILYAMHQLGLTPD
RPHRKSAHIVGEVMSKFHPHGDMAIYDALVRMAQDFASRYPLVDGHGNFGSVDGDAPAAM
RYTEARMARITMAMLADIEKNTVDFLPNYDGSNEEPKVLPARIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGVIRLIDNPDITIPELMQVIKGPDFPTGGKIMGRQGIREAYQTGRGAI
KVRAQATVEKIGGGKSAIIVHEIPFMVNKARLIEKIAELVREKKIDGITDLRDESDRRGM
RIVIELRRDAKPRVILNQLYKHTQMQETFGVIMLALVDGQPQVLNLRQMLGHYLEHQKEV
VVRRTRFDLEKAEARAHIVEGLRIALDHIDEVINTIRASRTVEIAKNALMEKFGLSEKQA
QAILDMRLQRLTGLERDKLEEEYKELLDRIAYLRGVLADERKVLQIIRDELTEMRQKFAD
PRRTVISDEDTTLEAEDLIPEEEVVITITNQGYIKRMPLDTYRSQKRGGRGITAMGTKEE
DFVRHLFITSTHHYFLFFSNRGKVYRLKVHEIPEAGRQAKGTALVNLIYIGPQERITAVI
PVREFSNGLYLFMATRFGVVKKTQLEQFDTSRRDGIIAIKLDDQDELVEVKLTSGREEII
LGTRQGLAIRFPEEEVHPYGRTARGVKGITLQPGDTVVAMDIVRPDGDVLVVTANGYGKR
TPVSDYRLQSRGGKGIISARVTGRNGPVVAMQVVKPDEEIMVISAEGIIIRLKASDISTM
GRATQGVMLMRLAPGDKLVAAALVSAEE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgttaacatcggcaaggtaattcccatcgacatcaacgaggaaatgaagcattcc
tacctggattacgccatgagcgtaatcgtgggccgggccctgcccgatgtgcgggacggg
ctgaaacccgtgcaccggcgcattctttacgccatgcaccagctggggcttacccccgac
cgtccccaccgcaagagcgcccacattgtgggtgaggtaatgtccaaattccacccccac
ggggatatggccatttacgacgccctggtgcgcatggcccaggactttgccagccgctat
cccctggtggacggccacggcaattttggttccgttgatggcgacgctccggcggctatg
cgctacacggaagcccgcatggcccgcattaccatggccatgctggcggatattgaaaag
aatacggtcgacttcctccccaactacgacggcagcaacgaggaaccaaaagtattgccc
gctcgcatccccaacttgctcgtgaacggctcttcgggcattgccgtgggcatggccacc
aatattccgccccacaacctgggggaagtaattgacggcgtgatcaggctaatcgacaac
ccggacatcaccatcccggagttgatgcaggtaatcaaggggcccgacttccccaccggc
gggaagattatgggccgccagggcatccgggaggcctaccagacgggccggggggccata
aaggtgcgcgcccaggccacggtggaaaaaattggcggaggtaagagcgccattatcgtc
cacgagataccttttatggtgaacaaggcccggctgattgaaaaaatcgccgaactggtc
cgggaaaagaaaatcgacggcattaccgatctgcgggacgaatcggaccggcggggaatg
cgcattgtcattgagctgcggcgggatgccaagccccgggtgatcctgaaccagctctac
aagcatacccagatgcaggaaaccttcggggtaatcatgctggccctggtggacggccag
ccccaggtattgaacctgcggcagatgctgggccattacctggagcaccagaaggaagtg
gtcgtccggcgcacccgctttgacctggaaaaggccgaggcccgggcgcacattgtggaa
ggtctgcgcattgccctggatcacattgacgaggtcatcaacactatccgggcctcccgg
acggtggaaatagcgaaaaatgcccttatggaaaaattcggcctttccgaaaaacaggcc
caggccattctggacatgcgtctgcagcgcctgaccggtctggagcgggataagctggaa
gaggaatacaaagaactcctggacagaattgcctacctgcggggtgtgctggccgacgag
cgaaaagttttgcagattattagagatgagctcaccgaaatgcggcagaaatttgccgat
ccccgccgcacggtgatcagcgacgaggacaccaccctggaagccgaggacctgattccg
gaagaagaagtggtgatcaccatcaccaaccaggggtacattaaacgcatgcccctggat
acctaccggagccagaagcgcggcggccggggcattaccgccatggggacaaaggaagaa
gactttgtgcggcatttatttatcaccagcacgcaccactatttcctcttcttttccaac
cgcggcaaggtctaccgcctgaaggtacacgaaattcccgaagccgggcgacaggccaag
ggtacagccctggtcaacctgatctatatcggtccgcaggaacgcatcaccgcagtaata
ccggtgcgggaattcagcaacgggctgtatctcttcatggccacccgctttggcgtggtg
aagaaaacgcagctggagcagtttgacacctcccgccgggacggcattatcgccatcaag
cttgacgatcaggacgagctggtggaggtaaagcttaccagcggtcgggaagaaattatc
ctgggcacgcgccaggggttggccattcgcttccccgaggaggaagtgcatccctacgga
cgcacagcccggggggtgaagggaatcaccctgcaaccaggggatacggtggtggctatg
gatatcgtgcgcccggatggagacgtgctggtggtcacagccaacggctacggcaaacgc
acccccgtatctgattaccgcctccagtcccggggcggcaaggggatcatcagcgcccgg
gtgaccgggcgcaacggcccggtggtggccatgcaggtggtcaaacctgacgaggaaatc
atggtcatcagtgccgaggggattatcatccggctcaaggccagcgacatttccaccatg
ggacgggcaacccagggcgtaatgctcatgcgtttagcgccgggggacaaactggtggcc
gcggccctggtcagcgccgaagaatga
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