KEGG   Desulfofundulus kuznetsovii: Desku_0605
Entry
Desku_0605        CDS       T01499                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dku  Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:dku00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dku02048]
    Desku_0605
Enzymes [BR:dku01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desku_0605
Prokaryotic defense system [BR:dku02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desku_0605
SSDB
Motif
Pfam: DEAD Cas3_HD Helicase_C HD
Other DBs
NCBI-ProteinID: AEG14217
LinkDB
Position
637588..640296
AA seq 902 aa
MSFLAKSNGVTLEKHIADVLASVRVLEQKNRECHPRELWRDLKLAAFLHDVGKVDPVFQQ
KLKSSVEEASRGASTISHNLISVFLINREKLLSYAQNPEAVLGAVAFHHWRDYYPDLFLG
ARGEEVSRMARSMLEEREMWEDLVNRLHHELQTLAHEYDIDPEVISFNKTWADYFQYNSI
GNAGLLLPPYLLSFLPQKLKLRDIKDDQERIFLAGNLMRCDHFASLIETEDLDLSPEDIE
HNLFPSTSELHRSLEEDFREKAAARNEPEPSFWQRDFFASAPDLREGSLVFIAPTGVGKT
EFAYLWGAGRKNIYLLPMRAAVNAMWQRTRRAFGRAREDLTGHIAFLHGEAAMELRSAGR
NPDLEGESLTRSLALARHLAEPYIIATGDQVAPAVLKYPGYERLYTVLMDSCLVVDEVQA
YDPRAAAVVTKLLEDVHNLQGRVLLMTATLPPFIQEEISQRLRLSSDRILNFLETSFGKA
FAGQVRHRLQFKVYRKKPAQTKLGYPDVVSFQVLMEEMVALARDGKKVLAVFNTVKAAQE
AYDLASSLLDGVEGSPPLLLIHSRYTRTDRRENEKAIEDYMPNGRAPRLEKGCLVLATQV
VEASLDIDADILYTELCPVDSLIQRLGRVWRRAARQASGMEEPSYANVYVLVETEDLCSG
CGRVYDRHLVALTGFILARQAMGDLELMGEQSHIENLLADYRDIVFKKDRRRAYNPDEKE
NSALCKLLAKAPQFCLNELEKVRLVALTYGALTWSWKRGEKDVGSYLKEYYETLDILDSG
YCSDRKYDAQRLFRQVYTVEVVPRKRIEEFGRKLKAFIERQDRPCYFDFNEQVLGNFTVP
VDFRSLPSHAVTQPLAEVIDISFINARFARKIERWLQGIMVVPAHYDSQRGLVLEVGENG
EE
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgtccttcttggccaagagcaacggcgtcacgctggagaaacatattgccgacgtcctg
gcttctgtacgggttctcgaacagaaaaaccgggaatgtcaccctcgagagttgtggagg
gatcttaaacttgccgctttcctgcatgacgtggggaaggttgatcccgttttccagcaa
aagcttaaaagtagcgtggaagaagcctcgcgaggggcgtcgaccatatcgcacaacttg
atctctgtttttctcatcaaccgggagaaactgctctcctatgctcagaacccggaggcg
gtcctgggtgcagttgccttccatcactggcgggactactatcccgacctcttcctcggt
gcaagaggcgaagaggtctcaagaatggcccggagtatgctggaagagagggagatgtgg
gaagatcttgtgaacaggttgcaccatgagcttcaaacccttgcccatgaatacgatatc
gacccggaagtaatcagttttaataaaacgtgggcggactacttccagtacaacagcatt
ggaaatgcagggttgcttctcccaccctatctcctctcttttttaccgcaaaaactcaag
ttgcgcgacattaaagacgatcaggaaaggatctttcttgccggaaatttgatgcgctgc
gatcactttgcctccttgattgaaacggaagatctggatctttcgccggaagacatcgaa
cacaaccttttcccatccacttcggaacttcaccgctcgttggaggaagattttcgggag
aaagccgctgcccgaaatgaaccggagccatctttctggcagagggatttctttgccagt
gcccctgaccttcgcgaaggatcgctggtgtttatcgcccctaccggcgtcgggaaaaca
gagttcgcctacctctggggcgctggaagaaagaacatctatcttttgcccatgcgggcg
gcggtgaacgccatgtggcagcgaacccgccgggcgttcggcagggcaagggaggatcta
acaggccacattgccttcctccacggtgaagcggcgatggaactccggagcgcaggtaga
aatccagacctggagggagagagtttgacgcgttccctcgccctcgcccggcacctcgcc
gagccctacatcatcgctaccggggaccaggttgctccggctgtcttaaagtacccgggc
tacgagcgcctgtataccgtcctcatggactcttgcctggtggtggacgaagttcaggcg
tacgatccaagggcggcggcggtcgtaaccaagcttttagaagatgttcacaatctacag
ggcagggtgcttttgatgaccgctacccttcccccctttattcaagaggaaattagccaa
cgactgaggctttcgtcagatcgtatccttaactttttggaaacctctttcggaaaagca
ttcgccggccaggttcggcatcgtctccagttcaaagtctacaggaagaaacctgcacag
accaaattgggctacccggatgttgtatccttccaggttttgatggaggagatggtagct
cttgccagggacggcaaaaaggttttagccgtatttaatacagttaaggccgcccaggaa
gcctatgacctggcgagtagtctgctggatggggttgaaggtagcccgcctcttctgctc
attcattcccgatatacccggacggacagaagggaaaacgagaaagccattgaggactac
atgcctaacggaagggcgccgcggctggaaaaggggtgcctcgtgcttgctacccaggtt
gtggaggcttcccttgatatagacgcggatatcctttataccgagctatgccccgtggac
agcctcatccagcgtcttggcagggtgtggcgccgggcagccagacaggcatccgggatg
gaggagccgtcatacgccaatgtttatgtcctggtagaaacagaggatctctgttcaggc
tgcggaagagtttacgacaggcaccttgtggccctgaccggatttatcctcgcccgccaa
gctatgggagatctggaactgatgggggaacagagtcatattgagaacctcctggcagat
tacagagatattgtgttcaaaaaagataggaggagggcttataacccggatgaaaaagaa
aacagtgcactgtgtaagctcttggccaaagcccctcagttttgcctcaacgagctggag
aaagtgcgactcgtggcattaacttacggtgcactcacctggtcctggaagcgcggcgaa
aaggatgtcggctcctacctcaaggaatattacgagactctcgatatcctggacagcggc
tactgttccgatcgtaagtacgatgcccagcgtctcttccgtcaagtgtataccgtggag
gttgtccctcggaaaagaatcgaggagttcggcagaaagctgaaggctttcattgaacgg
caagataggccatgctattttgattttaatgaacaggtcctgggcaattttacggttccc
gtggatttccgttccttacccagtcatgcagttacacaacccctggccgaggtaatcgac
attagcttcatcaatgccagatttgcccggaagatcgagcgctggctccagggcattatg
gtagtccccgcccactacgacagccagcggggtctggttctggaggtcggtgaaaatgga
gaagaatga

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