Desulfofundulus kuznetsovii: Desku_0606
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Entry
Desku_0606 CDS
T01499
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dku02048
]
Desku_0606
Enzymes [BR:
dku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Desku_0606
Prokaryotic defense system [BR:
dku02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Desku_0606
Subtype I-B factors
Desku_0606
Subtype I-C factors
Desku_0606
Subtype I-D factors
Desku_0606
Type II CRISPR-Cas system
Subtype II-B factors
Desku_0606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Novirhabdo_Nv
Motif
Other DBs
NCBI-ProteinID:
AEG14218
LinkDB
All DBs
Position
640283..640822
Genome browser
AA seq
179 aa
AA seq
DB search
MEKNEEHDFTASQLAVTGTMVAYYHICRRKLWLFARGLNLENVSGNPDVIKGKLIHESRF
QRENYRDLSFDRVQIDFIKFGDQIHLHEIKKSRKFEEAHIMQMKYYIFFLHSRGVRCFAG
TIHYPTAMRKVEVTFNREDELRIAEALRGIENVLKKNIPPGKVNRKFCRRCAYFDFCYV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatgaagagcacgatttcaccgcgtcccagcttgccgtaaccggtacgatg
gttgcttactaccatatttgccggcgcaagctctggctctttgcccggggccttaacctg
gaaaacgtctccgggaacccggacgtgattaagggaaaacttatccacgagtcccgcttc
cagcgggaaaattaccgggacctttcttttgatcgggtgcaaatcgactttattaagttt
ggcgatcaaatacatttgcacgagatcaagaagagccggaagtttgaagaggcccatatc
atgcagatgaagtactacatcttttttttacattccaggggcgtcaggtgttttgcggga
acgattcattatcctaccgcgatgcgcaaagtggaggttaccttcaacagggaagacgag
ctacggattgccgaggcattgaggggtatagaaaatgttctcaagaaaaatatccctccc
ggcaaagtcaaccggaagttctgcaggcgttgtgcctatttcgacttttgttatgtataa
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integrated database retrieval system