Desulfofundulus kuznetsovii: Desku_0689
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Entry
Desku_0689 CDS
T01499
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dku03400
]
Desku_0689
DNA repair and recombination proteins [BR:
dku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desku_0689
Archaeal homologous recombinant proteins
Desku_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
CENP-H
MbeD_MobD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEG14298
LinkDB
All DBs
Position
738498..742118
Genome browser
AA seq
1206 aa
AA seq
DB search
MRPVELRLAGLHSYRQEEVVDFEALCEQGIFGIFGPTGSGKSSILDAVTLALFGEVKRAS
RGREGIINQQSEQARVAFTFEVGRGEERCRYRVERVLRKSGDFGAHTRECRLVRIDPDGE
RVLADGADQVKTEVQRLLGLTADDFTRAVVLPQGRFAEFLALRPADRNQMLERIFELDRF
GEQLKKRVSDAGAKVQAGLDRIEAEQKGLGDCSPQALERARQALEKNRAARREAEQNLQA
IRRRLEEAREIRQAQEQRVNLRRRLQELQAAETQVRWAEERLERAARAETLRGLLEEYGR
LEEDLERRREGLRSLQEELARREEAARVAAEEAARVRQQWDEKGPVLLKQQVWLEQAREQ
EKELDTWLAQQGREREQLEEWERAAQVLERQQAELSSQLDEGERHLAELYRLREQLQVAP
EEAEQARSALDLYRELSRLGQEIKKMEGERDEAGRELAELQHQETELARQVQELEWELKR
YEEGLEHLQGNPPVPDGYLEKRAGEIQDLRHRVQALQELAARYNRLQGEHRQAGEQRQSL
ERQREAWRQKAAILQQALDEAGKALERARRELEEARCRNMAAALARTLEVGRACPVCGSP
HHPSPASPAGTELTPYEKAVEAAEEEQARRRDEWQECEKKIVQLETEIAALKLREEQLAG
EQEQVGAEGKRLRGELPAEWQGVPVQDLPALLQRAEQAYQEQQRAWRDWQQHLKEALDRK
EELRRRLDEQRPALARLQSDRAGLARQIDVLCRHLGEKGAEQQAVGEKLRQLLEVLGLAD
PDQVPGYWDALREKQQKHRRCQDEIAGLEAELKDLAGRLQQLKDDLRDLVIQKGALKATL
AGRAEQIRRLQAELHQLTGGLRVQEALEQVREELSLLQGAVARAEEESQKAAEAFQRVRL
ELKGEEQTCAALQERLEDLCRRLERSARENHFAGPAEAKDALLDPQEREELTDQVKKHRQ
EEQVLLKGLQEVEARLKGMRLDEGDWLRLQEELHAAEEALGLAQQQEGAAGVLLQRLMEN
QQRWAVLEEERRQLARRSGLLRELEGLLRGRALVEFLARRRLENLVALATERLGRLTGYR
YALELDGQGGFILRDEGNGGLKRPVSTLSGGETFLVSLALALALSDQIQRRGRAPLEFFF
LDEGFGSLDEQCLEAVMDTLERLPLERVAIGLISHLPQLKSRLPRRLVVEPARPGGPGSR
VRLELG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgaggccggttgagctacgcctggccgggttgcacagttaccgccaggaagaggtggtg
gatttcgaggccctgtgcgagcaggggatctttggcattttcggacccaccggcagcggc
aagtcctccatcctggatgcggttaccctggccctgtttggagaggtgaagcgggccagc
cggggcagggagggaatcatcaaccagcagagcgagcaggcccgggtagccttcaccttt
gaagtgggccggggggaggagcggtgccgctaccgggtggagcgggtgctgcgcaaaagc
ggcgattttggcgctcatacccgggagtgccggctggtgcgtattgacccggatggggaa
agggtactggcggatggagccgaccaggtgaaaacagaggttcaaaggctgctggggctc
accgcggacgatttcacccgggcggtggtcctgccccagggccgctttgccgagtttctg
gccctgcggccggccgaccggaatcaaatgctggagcgcatttttgaactcgaccggttc
ggcgagcagttaaagaaacgggttagcgatgccggggctaaagtgcaggcaggcctggac
aggatagaggcggagcaaaagggtctgggcgactgttcaccccaggctttagagagggcc
cgtcaggccctggaaaagaaccgggcggcccgccgggaagcggaacaaaacctgcaggca
atccgcaggcgcctggaggaggcccgcgagatccgccaggctcaggagcagcgggtcaac
ctgcggcgccggctgcaggaactccaggcggcggaaacgcaggtgcgctgggccgaggaa
cgcctggaacgggcggcccgggccgaaaccctgcgcgggttgctggaagagtacgggcgc
ctggaagaagatctggaaagacgccgggaggggctgcgctctttgcaggaggaactggca
cggcgggaggaggctgcccgggtggcggcggaggaggccgcccgggtgcggcagcagtgg
gatgaaaagggaccggttcttttaaagcagcaggtgtggctggaacaggcccgggagcag
gaaaaggagctggacacctggcttgcccagcagggtagggaacgggaacagctggaagaa
tgggaacgggccgctcaggttctggaaagacaacaggcagaactctcttcccagcttgat
gaaggggagcggcatctggcagagctttacaggctgcgggagcagcttcaggttgcgccg
gaggaggcggagcaggcccggtccgccctggatctgtaccgcgagctgtcccggctgggc
caggaaataaaaaagatggaaggggagcgggatgaggcgggccgtgaacttgccgagctg
cagcatcaggagacggaactggcccggcaggtgcaggaactggaatgggagctgaagcgg
tacgaagagggtttggagcacctgcagggaaacccgcccgtaccggatggatacctggaa
aaacgggccggtgaaatacaggacctcaggcaccgggtccaggcgctccaggaactggcc
gcccggtacaacaggctccagggggagcaccggcaggccggggagcagcggcaatcgctc
gagcgccagcgggaagcctggaggcagaaggcggcaatcctgcagcaggccctggatgag
gcaggtaaggccctggaacgggcccggcgggaactggaggaagcccgctgccggaatatg
gccgccgccctggcccggacgctggaggtggggcgggcctgcccggtctgcggttcgccc
catcacccctcgcccgcctcccctgcggggacggaactcaccccctatgagaaggcggtg
gaagccgcagaagaggagcaggcgcggcggcgggatgaatggcaggagtgtgaaaagaaa
atcgtccagctggaaacggagattgcggccttaaagctccgggaggagcagctggcggga
gaacaggagcaggttggggcggagggcaagcgtttgcggggcgaactgccggcggaatgg
cagggggtaccggtacaggatctccccgccctgctgcaaagggcggagcaggcatatcag
gagcagcagcgggcctggcgcgactggcagcagcacttaaaagaagccctggaccggaaa
gaggaactgcgccgccggctggatgaacagaggcccgcccttgcccgcctgcagtccgac
cgggcgggcctggcccggcaaatcgatgtcctctgccggcacctgggggaaaaaggggcg
gagcagcaggcggtcggggaaaaactccggcagcttctggaggtgctgggcctggcggac
ccggaccaggttccggggtactgggatgctttaagggaaaagcagcaaaagcaccggcgc
tgccaggacgagatagcagggctggaggcggagttgaaagatctggccgggcggcttcag
cagctcaaagatgacctgcgggacctggtgattcaaaagggtgccctgaaagccaccctg
gcgggcagggcagaacagatccggcggctccaggcggagttgcaccagcttaccggcggt
ttgcgggtgcaggaggccctggagcaggtgcgggaagagctgtccttgctgcagggggcg
gtggcccgggcggaggaagaaagccagaaggcggctgaggccttccagcgggtccggctg
gaactgaagggcgaagaacagacctgtgccgccctgcaggagcggctggaggacctgtgc
cggcgtctggagcggtcggcccgggagaaccatttcgccggtcccgccgaggctaaagac
gccctgctggacccgcaggagcgggaggaattaaccgatcaggtgaagaaacaccgccag
gaggagcaggtgctgctgaaagggctgcaggaagtggaggcccgcctgaaaggcatgcgc
ctggacgagggagactggctgcggctgcaggaagaattacacgccgcagaagaagccctg
ggtctggcccagcagcaggagggggcggcgggggtgctgctgcaaaggctaatggaaaac
cagcagcggtgggccgtcctggaggaggagcggcggcagctggcccggcgttccgggctc
ctgcgggagctggagggattgctgcggggcagggcgctggtggagtttctggcccgccgg
cggctggagaacctggttgccctggccacggagcggctgggccggctcaccggctaccgt
tacgccctggagctggacgggcagggggggttcattctccgggatgagggtaacggcggc
cttaaacggcctgtttccaccctttccggcggggaaaccttcctggtttccctggccctg
gccctggccctgtcggaccagattcagcggcggggccgggctcccctggagttctttttc
ctggatgagggtttcggttccctggacgagcagtgcctggaggcggtgatggataccctg
gagcgcctgcccctggaacgggtggccatcggattgatcagccacctgccccagttgaaa
agccgcctgccccgccgcctggtggttgaaccggcccggcccgggggcccgggcagccgg
gtccgcctggaactggggtaa
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