KEGG   Desulfofundulus kuznetsovii: Desku_1336
Entry
Desku_1336        CDS       T01499                                 
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
dku  Desulfofundulus kuznetsovii
Pathway
dku02024  Quorum sensing
dku03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dku00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desku_1336
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Desku_1336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dku03019]
    Desku_1336
   03036 Chromosome and associated proteins [BR:dku03036]
    Desku_1336
Messenger RNA biogenesis [BR:dku03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Desku_1336
Chromosome and associated proteins [BR:dku03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Desku_1336
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AEG14919
UniProt: A0AAU8PV48
LinkDB
Position
1357241..1357483
AA seq 80 aa
MSKPQINLQDAFLNQVRKENVPVTIFLVNGFQLKGVVRGFDNFTVILESDGKQMMVYKHA
ISTVSPMRPMSTSFSEQKAQ
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcaagccacaaataaatttgcaggacgcctttttaaatcaggtgcgcaaggaaaat
gttcccgtgaccatctttctggtcaacggtttccagctaaagggagtggtcaggggcttt
gacaattttaccgtcattttggaaagtgacggcaagcaaatgatggtttataaacacgcc
atttccaccgtcagccctatgcgtcccatgagtacctccttttccgaacaaaaagcacaa
taa

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