Desulfofundulus kuznetsovii: Desku_1686
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Entry
Desku_1686 CDS
T01499
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dku
Desulfofundulus kuznetsovii
Pathway
dku03420
Nucleotide excision repair
dku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desku_1686
03430 Mismatch repair
Desku_1686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dku03400
]
Desku_1686
Enzymes [BR:
dku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desku_1686
DNA repair and recombination proteins [BR:
dku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desku_1686
MMR (mismatch excision repair)
Other MMR factors
Desku_1686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF3553
ResIII
MSSS
AAA_22
SURF4
Motif
Other DBs
NCBI-ProteinID:
AEG15264
UniProt:
A0AAU8PVW3
LinkDB
All DBs
Position
complement(1688552..1690756)
Genome browser
AA seq
734 aa
AA seq
DB search
MDLLKNLNEAQKEAVQHKDGPLLVLAGAGSGKTRVLTTRIAYLLQQGVDPHHILAITFTN
KAAREMKERVQTMVPHVARDLWVSTFHSACLRILRKQARFLGYSENFVVYDEHDQQTVLK
DCLKELNLDEKRFPPRAVAAIISGAKNKLLGPDAYQDEVFDFYSRHVARIYALYQDKLFR
NNALDFDDLIMLTVRLFRENPAVLRYYQNRFRYILVDEYQDTNHAQYVLVNLLAREHRNL
CVVGDPDQGIYSWRGANIQNILDFEKDYPDAKVVKLEQNYRSTQTILDAANHVIRRNRGR
REKRLWTAAGAGNPVVVYLAHDERAEANFVADRITRLHRLGVPYRDMAVLYRTHAMSRVL
EEILLHRGIPYTIVGGLRFYDRKEIKDLLAYLRLVVNPSDTVSLRRIINVPRRGIGEASF
NRLLAFSAAREIPVLEALARVEEIPGLTKSVRAACMELARLFGWLYEHQGELTVTGLAWE
VLQRSGYWQELLAENTVESRTRQENLKEFLSVTQDFDRQAGEQTLSAFLAELSLVSDIDR
YDEEADQVVLMTLHSAKGLEFPVVFLVGMEEGVFPHSRSLVEPAELEEERRLCYVGITRA
RERLYLTHCWQRTLYGATRHNDPSRFLEEIPPHLVTVDDPLDRGNGAKRPKPAPGGAGLP
RGAAKETEPGMLPPVREQAPVYAFSPGDRVRHRKWGQGTVINVRGQGENAELQVEFPNLG
TKILLARYAPLERV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacctgttgaaaaacctcaatgaagcccaaaaagaagcagtgcagcacaaagacgga
ccccttttagtgctggcgggcgcgggcagcggtaaaacccgggtactgaccacccgtatc
gcctatctcctgcagcagggggtggacccgcaccatatcctggccatcacctttaccaac
aaggcggcccgggaaatgaaggagcgggtccagaccatggttccccatgtagcgcgggac
ctgtgggtttccaccttccattcggcctgcctgcgcatcctgcgcaagcaagcccgtttt
ctgggctactccgagaattttgtggtttacgatgagcatgaccagcaaacggttctgaaa
gattgcctgaaagaattaaacctggatgagaaaaggtttccaccccgggccgtggccgcg
atcatttccggagcgaaaaataaactgttaggacccgatgcttaccaggacgaggtcttt
gatttctattcccgtcatgtggcccgtatttacgccctgtaccaggacaagctattccgc
aacaacgccctggattttgacgacctgattatgctcacggtgcgcctgttccgggaaaac
cccgcggttttacgctactaccagaaccgttttcgttatatcctggtggacgagtaccag
gacaccaaccacgcccagtacgtgctggtgaacctcctggcccgggagcaccgcaacctc
tgcgtggtgggcgacccggaccagggtatttacagctggcgtggggcgaatatccagaac
atcctcgactttgaaaaagattaccccgatgcaaaggtggtcaaactggagcaaaactac
cgctccacccagaccattctggatgccgccaatcacgtcatccggcgcaaccgggggcgc
agggaaaaaaggctctggacggccgccggtgcggggaacccggtggtggtttacctggcc
catgacgagcgggccgaggccaatttcgtggccgaccgcattacccggctccaccgcctg
ggagtaccctaccgggatatggcggtgctttaccgcacccacgccatgtcccgggtgctg
gaagaaatcctgctgcaccggggtattccctacaccattgtgggcggcctgcgcttctac
gaccgtaaggaaatcaaggacctgctggcctacctccggctggtggtgaacccgtcagac
acggtaagtttaaggcgcattattaacgtaccacggcggggcatcggggaggcttccttt
aacaggctgcttgccttcagtgcggccagagaaatcccggtactggaagccctggcccgg
gtggaggaaatacccggcctgaccaaaagcgtacgggcggcctgcatggaactggcccgc
ctctttggctggctttatgaacaccagggcgagttaaccgtaaccggtctggcctgggaa
gtgctccagcgatcaggatactggcaggagctcctggccgaaaatacggtggaatcccgc
acccggcaggaaaacctgaaggaatttctctcggtgacccaggacttcgaccgccaggcc
ggggaacaaaccttgagcgcctttctggccgagctttccctggtgagcgacatagaccgc
tacgacgaggaagccgaccaggtggtgctgatgaccctgcacagcgccaaggggctggag
ttcccggtggtcttcctggtggggatggaggagggggttttcccgcactcccgttccctg
gtggaaccggcggaactggaggaggaaaggcgcctctgttacgtaggcattacccgggcc
agggaacggctttatttaacccactgctggcagcgcaccctgtatggtgccacccggcac
aacgacccgtcccgttttctggaagagataccgccccacctggttacagtcgatgacccc
ctcgatagggggaatggggcaaagcggccaaaacccgccccgggcggggccggactgccc
cggggagcggccaaagaaacggaacccggtatgctcccgcccgtccgggagcaggctcca
gtgtacgccttcagccccggtgaccgggtcaggcaccgtaaatggggccagggtacggtg
atcaacgtaaggggacagggggaaaacgccgaattacaggtggagttccccaacctgggc
accaaaatccttctggcccgctacgcccccctggaacgggtttaa
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