Desulfofundulus kuznetsovii: Desku_2540
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Entry
Desku_2540 CDS
T01499
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dku03016
]
Desku_2540
Enzymes [BR:
dku01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Desku_2540
Transfer RNA biogenesis [BR:
dku03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desku_2540
Prokaryotic type
Desku_2540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AEG16065
UniProt:
A0AAU8PD79
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All DBs
Position
complement(2524403..2525326)
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AA seq
307 aa
AA seq
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MDGILNILKPPGMTSHDVVAFIRRLMGGGKTGHTGTLDPGAAGVLPVCVGRATRVIQFLP
GDKEYRVEITFGRTTSTGDAFGEIVYRGDAASLTSGALEEALRAFVGEIMQVPPMTSAVR
HQGKKLYELARQGIEVKRQPRRVNIYSLRLVRMDRAGTPHPRALVDVACSAGTYIRTLCT
DLGQLLGCGAYMSFLLRTRAGVFSLDEALTLEEVEEFARQGRLSGKLVRLEQALEHLPPI
YVRSGAVDRVKSGSPLYWPGVAAAPDFLQEGQLVRLCTGRAVLAVARPVADPKRPGYYQF
KPIRVLI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggatggtattctgaacattttaaagccgcccgggatgacttcccatgatgtggtggcc
tttatccggcgcttaatgggtggtgggaagacgggtcataccggcaccctggacccaggg
gcggcgggggtgttgccggtatgcgtaggacgggccacccgggtaatccagtttcttccc
ggtgataaggagtaccgggtggaaattaccttcggccggaccacttccaccggcgacgcc
tttggggaaatagtttaccggggcgatgccgcatcactaaccagcggggcgttagaagaa
gccttaagggcctttgtgggcgaaatcatgcaggttccgcccatgacttcggcggttcgt
caccaggggaaaaagctttatgagctggcaaggcagggaatagaggtgaaacgacagcct
cgacgggtaaatatttattccctgcggttggtacgcatggatcgcgcaggtacgcctcac
ccccgggccctggtagacgtggcctgttcagccggaacatacatacgcacattatgcacc
gatttgggacaactactgggatgcggggcgtatatgagttttcttttacgcaccagggcg
ggcgttttttccctggatgaagcacttaccctggaagaagtggaggaatttgcccggcag
ggcaggctttccggtaagctggtcaggttggagcaggcgctggagcacttgccccccata
tatgtccgctcgggggcagtggaccgggttaagtccggcagccctttatactggccgggt
gtggctgcagcaccagattttttgcaggaaggccagctggtcagactgtgtactggccgg
gctgttttggctgtggccaggccggtggccgatccgaaacggccgggttactaccagttt
aaacctataagggtattgatttaa
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