KEGG   Desulfofundulus kuznetsovii: Desku_2805
Entry
Desku_2805        CDS       T01499                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dku  Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:dku00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dku02048]
    Desku_2805
Enzymes [BR:dku01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desku_2805
Prokaryotic defense system [BR:dku02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desku_2805
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 HD
Other DBs
NCBI-ProteinID: AEG16317
UniProt: A0AAU8PPT4
LinkDB
Position
2792079..2794388
AA seq 769 aa
MPVSLLAKKRAGVDVYQTLAGHTEDALIVLYRYLREHRPAVQRLVDEQNLPFTHYCQILF
FTLFLHDIGKATREFQERLVKEELSRELSHTFFSLPLVETDLPPEYNLLVRILVLTHHTQ
PFDHLYYSFELLPRVNYLTEQIKDYLQSYQDLHARYFKDIFPLSARPVFRPPAYIAETGL
RERLQGEVARLQQGVSLWGNAARTKALYCFAITLLKYCDSQASRAFHQAALTGGTVCGSL
LRNVVNAQDRSSGPYHLESAFDRPALNRPPFAAATVKATGTAAGGGFLLLLAPPGSGRMT
LALARAVSLGRERCRKKLVWICPGQIASGFTRHQLTRFWGAEQVALVHATSYYGNDPYLW
GLPHNNYGRPDGTATNSRESIFACPVTVATLDHLVFSLVHGLRQADYILGNLMQAVVVLD
GLPEPSSPAFHYTLDALALLRKMEIPHIILETALAPALKKYLADAGYVVEDYVAGHNKPL
FELIRCQGKQPELIREYYRLGLRQVVYTPSAREARQITRKLKSALPGCPVFLYHSLFTHG
DRERLEREILSLGEKPGPWLLIIGGDIDPAGPPACDVVHTGSAGPTILLRHSYPLWRRDP
DSQFLEGKDNGSHGPGVLVLHSSSSRNEPESHSFNPALTQPLSVTPGYLEAILEEEYARN
KHIPTNLEEIFRACTLFGYSPREVRYAASPLVNLWQPPERLIDVIPAELWQEELLAIPTA
MGERKMKVPAEWYSRHPQLFSILDSPREKIILCHLAYDQERGLELPENG
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgcctgtatccctcctggccaaaaagcgcgcgggcgtggatgtatatcaaaccctcgca
ggccacacggaagatgccctgattgtcctgtaccgttacctgcgggaacaccgcccggca
gtgcagaggttggttgacgagcagaacctgccttttacacattattgccagatccttttt
ttcaccctgtttttacacgatatcggcaaggccacccgggaatttcaagaacggctggtc
aaagaggaactgagccgggagctttcccatacctttttcagcctgcccctggtggaaacg
gatctgccgccggagtacaatctcctggtcaggatactggtacttacccaccacacccag
cctttcgaccacctttattacagctttgaactgcttccccgggtaaactacctgactgag
cagataaaagattacctgcaaagctaccaggacctgcatgcccgttactttaaggatatc
tttcccctttccgcccggccggttttccgtcctcctgcttacatcgccgaaaccggcttg
agagaaaggctgcagggggaagtagcccggcttcagcaaggagtaagcctgtggggcaat
gccgcgcgaaccaaagccctgtattgttttgccattacccttttaaagtattgtgacagc
caggccagccgggctttccaccaggccgccctgaccggcggaacggtttgcggatcgcta
ttaaggaacgtggttaatgcacaggacaggagttcaggaccttatcaccttgagtcagcc
ttcgaccgcccggcccttaaccggccgccttttgccgctgcgacggttaaagcaaccggt
acggcggccggtggcgggtttttgctgctcctggcaccccccggctccggaaggatgacg
ctggccctggcccgggccgtgtccctgggccgggaaagatgccggaaaaaactggtatgg
atctgccccggacaaatcgcctccggctttacccgccaccagttaacccgcttctggggc
gcggaacaggtggccctggtgcatgctacgagctactacgggaatgacccttacctctgg
gggttgccgcataacaattacggccgccctgacggtacggccaccaattccagggaaagc
atttttgcctgcccggtaacggtagccaccctggaccatctggttttctccctcgtccac
ggtttacggcaggccgattatatcctgggcaacctgatgcaggcggtggtggtcctggac
gggctgccggaaccgtcgagcccggcctttcattataccctggacgccctggccctgctg
cggaaaatggagatcccccatataattctagaaacggcactggctccggcattaaaaaaa
tacctggcggatgcgggttatgtggtggaagattacgttgccgggcacaacaagcctctc
tttgagttgatccgctgccagggcaagcaaccggagctgatccgggaatactaccgcctg
ggtctcaggcaggtggtttataccccgtccgcccgggaggcaaggcaaatcacccgcaaa
ctcaaatcggctttgcccggatgcccggtttttctttatcattccctgttcacccacggg
gaccgggagaggctggaaagagaaatactgtcactgggggaaaaacccggcccctggttg
ttaataattggtggggacatcgatccagcgggacctcccgcatgtgatgtcgtgcatacg
gggagtgccggacccaccattctgttacggcacagttatcccctctggcgcagggaccct
gactcgcaatttcttgagggcaaggacaacggtagccatggaccgggggtactggtgctt
cactcttcctccagcagaaatgaaccagaaagccatagctttaacccggctctcactcaa
cccctttccgtcactccgggctacctggaagccatcctggaagaggaatatgcgcggaat
aaacacattcccaccaatctggaggaaatattccgcgcctgtacactgttcggctattca
ccccgggaggtgcgctacgccgcatcccccctggtaaacctgtggcaacccccggagcgg
ttaatagacgtaatcccggctgaattgtggcaggaggaacttcttgccataccgactgcc
atgggggaacgtaaaatgaaggtgcccgcagaatggtactcccgccatccccaattattt
tctatcctggacagcccccgggagaagatcatcctttgtcaccttgcatatgaccaggaa
cgcgggctggaattgccggaaaacggatga

DBGET integrated database retrieval system