Desulfofundulus kuznetsovii: Desku_2906
Help
Entry
Desku_2906 CDS
T01499
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dku
Desulfofundulus kuznetsovii
Pathway
dku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desku_2906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dku03019
]
Desku_2906
03110 Chaperones and folding catalysts [BR:
dku03110
]
Desku_2906
03029 Mitochondrial biogenesis [BR:
dku03029
]
Desku_2906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dku04147
]
Desku_2906
Enzymes [BR:
dku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Desku_2906
Messenger RNA biogenesis [BR:
dku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Desku_2906
Chaperones and folding catalysts [BR:
dku03110
]
Heat shock proteins
HSP60 / Chaperonin
Desku_2906
Mitochondrial biogenesis [BR:
dku03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Desku_2906
Exosome [BR:
dku04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desku_2906
Exosomal proteins of other body fluids (saliva and urine)
Desku_2906
Exosomal proteins of breast cancer cells
Desku_2906
Exosomal proteins of colorectal cancer cells
Desku_2906
Exosomal proteins of bladder cancer cells
Desku_2906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AEG16411
UniProt:
A0AAU8PE85
LinkDB
All DBs
Position
complement(2904433..2906052)
Genome browser
AA seq
539 aa
AA seq
DB search
MAGKEIIFREDARRALERGVNALAEAVRVTLGPKGRNVVLEKKFGSPMITNDGVTIAREI
ELTDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMIIKRGI
EKAVDKAVEAIKAAAKPVESKAAIAQVASISANDPSIGELISEAMEKVGKDGVITVEESK
GIGTTLEVVEGMNFDRGYISPYMITDTEKMEATLNDPYILITDRKISAVADLLPILERIV
QAGKPLLIIAEDVEGEALATLVLNKLRGTLSCVAVKAPGFGDRRKAMLEDIAILTGGTVI
SEELGLKLDKATIDMLGRASKVRVKKEETIIVGGAGSQDKINARIASIKKQIEETTSDFD
REKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALNATRAAVEEGIVSGGGVAYVA
AIKALDNIETASLDEKTGVDIVRRALEEPLRQIANNAGAEGSVVVEKVKALPDGMGFNAL
TGEYVNMIEAGIVDPAKVTRSALQNAASIAAMILTTETLVAEKPEKEKDTGMGGGMPPM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttggctggtaaagagattattttccgggaagacgcgcgccgtgccctggaaaggggcgtc
aatgccctggctgaagcggtacgggttaccctgggaccaaagggccgcaacgtggtgctg
gagaagaagtttggttctcccatgatcaccaacgacggtgtgaccattgcccgggaaatt
gaattgaccgatccctttgaaaatatgggtgcccagctggttaaagaagtagccaccaag
accaatgatgtggccggcgatggtaccaccactgctactgtactggcccaggccattgtc
cgggaaggtttgaagaacgtggctgccggcgccaacccgatgatcatcaagcggggcatt
gaaaaggcggtagataaagccgtagaggccatcaaggcagccgccaaaccggtggaaagc
aaggctgccattgctcaggtagcttccatttcggccaacgacccgtccatcggcgaattg
atctctgaagccatggaaaaggtgggcaaggacggtgtaattaccgtcgaggaatccaag
ggtatcggcaccaccctggaagtggtggaagggatgaatttcgaccggggttacatatcc
ccgtacatgatcaccgataccgagaagatggaggccaccctcaacgatccctacatcctc
attaccgaccggaagatcagcgccgtggccgacctgctgcccattctggaaaggatcgtg
caggcgggcaaaccgctgttgatcattgccgaggatgtggaaggtgaggccctggctacc
ctggtgctgaacaagctgcgcggcactctgtcctgcgtggccgtcaaggctcctggcttt
ggtgaccggcgcaaggctatgctggaggacatcgccattcttaccggcggtaccgtaatc
agcgaagagctgggcctcaagctggacaaggccaccatcgacatgctcggtcgggcctcc
aaggtacgggtgaagaaggaagaaaccattattgtcggcggtgccggttcccaggacaag
attaatgcccggatcgcctccatcaagaagcaaatcgaagaaactacctccgactttgac
cgggagaagctgcaggagcgtctggccaagctggccggcggcgtagcggtcatccaggtt
ggcgcagccactgaaactgaaatgaaggagaagaagctgcgcattgaggacgccctgaac
gccacccgggctgccgtggaggaaggtattgtttccggtggcggtgtggcctatgtggca
gccatcaaggctttggacaatattgaaaccgccagcctggatgaaaaaaccggtgtggac
attgtgcgccgggctttggaagaaccgctgcggcaaattgccaacaatgccggtgcggaa
ggttccgtggtggtggagaaggtcaaggccctgcccgatggtatgggcttcaacgccctg
accggcgagtatgtgaacatgattgaagccggtattgtggacccggccaaagtgacccgg
tccgccctgcagaatgccgcttccattgccgctatgattctgaccactgaaaccctggtg
gcggaaaagccggaaaaggaaaaggataccggtatgggcggcggcatgcctccaatgtaa
DBGET
integrated database retrieval system
