Desulfofundulus kuznetsovii: Desku_2928
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Entry
Desku_2928 CDS
T01499
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dku
Desulfofundulus kuznetsovii
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dku03000
]
Desku_2928
Transcription factors [BR:
dku03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desku_2928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS_9
HTH_8
PAS_4
HTH_50
GAF
AAA_5
AAA_2
Mg_chelatase
PAS
MCM
PAS_8
AAA
HTH_17
AAA_3
Diguanyl_cycl_sensor
HTH_23
HTH_1
MAPKK1_Int
HTH_29
HTH_22
Phage_30_3
PAS_7
NUMOD1
PAS_10
DUF134
HTH_7
Mga
AAA_16
HTH_28
Xre-like-HTH
HTH_11
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AEG16432
UniProt:
A0AAU8PK11
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All DBs
Position
2926688..2928670
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AA seq
660 aa
AA seq
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MLQAAQEMKMLWKLVRTVGDKNVRVREEIKASWARSLAHGVNPYMKANQTVLTAEEFKNK
LQENRELLEVAVPVVKNIYDFVKGSGFAVAIADKDGVILVMIGDEEGLEFTRRANLIEGS
VWSEEVMGTNAIGLCLVEGKPIQVYGYEHFCICCYNGTCSAAPIRDPNGRIIGALDITGY
FEKVHYHTLGMVVAGANAIESQLAIKRVLRENVLANHYKNLIMESISDGILTIDNYGYIT
HLNTQAAKLLRLDPSTAIGKRLTEIFGDIEANRYFINLIQSSRAFTDTIIHIHRKHEKIR
CNVSCRPLNDHDGTSLGRVVVLQEFSRVNRLVNRLAIPKAKVSFSDLVGEDPVFLEAVKL
GKAAANSDSNVLLLGESGTGKELFAQSIHNASIRAEQPFVSVNCGAIPRELIASELFGYE
EGAFTGARKGGNPGKFELADQGTIFLDEIGEMPLDLQAALLRVLEEQRVMRLGGREYLPV
NVRIIAATNKNLLKEVERGTFRRDLFYRLNVMVIFLPALRERREDIALLTNHFVKRLSKN
KGKDIKGVSPEVMAIFLNYHWPGNVRELQNVLERAVNLCTGTVITPDLLPPELSQYNNYM
ISHNLTPTKEESKLIKKAEEQAIRNCLARYKSKTKAAEYLGISRATLYRKIKQYGIELEQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctacaggccgcccaggaaatgaagatgctctggaaactggtgcgtaccgttggtgat
aaaaatgtgcgtgtacgggaggaaattaaagcctcgtgggccagaagcctcgcacatggg
gtcaatccttatatgaaggccaaccagaccgtgttaacggccgaagaatttaaaaacaaa
ctccaggaaaaccgggaattgttagaagtggctgtacctgtagtgaaaaacatttatgat
ttcgtaaagggaagcggttttgcagtggccattgcagacaaagatggggttatactggtc
atgatcggggatgaggaaggactagaatttaccaggagagcaaatctaattgaaggttca
gtttggtcggaagaagtaatggggaccaatgccattggactgtgtctggtggaagggaaa
cctatccaggtctacggttacgagcatttttgcatctgttgctataatggtacttgttca
gcagcacctattcgtgatccaaacggccggatcatcggggccctggatatcaccggatat
tttgaaaaagtgcattaccatactctgggtatggtagtagctggtgcaaatgccattgag
agccagctagccattaaaagagtacttcgggaaaatgttctggccaaccattacaaaaac
ctgatcatggaatcaatctcggatggaatcctaactattgacaattacggctacatcacg
caccttaatacccaagcggccaaattgctgcggctcgacccaagtacggctatcggtaaa
aggttaaccgagatttttggggatatagaagcaaaccgttattttatcaatcttattcaa
tcaagtagggcctttaccgataccatcattcatatccaccggaaacacgagaaaatccgg
tgtaatgtgagctgtcgcccgcttaacgaccacgatggtacaagcctggggcgggtggta
gttctccaggaattttcacgggtcaaccggttggttaaccgtctggctataccaaaagcg
aaagtaagtttctccgatctggtgggcgaagatccagtatttctggaagcagtaaaactg
ggaaaggctgccgccaactccgattccaacgttcttttgctgggagaaagtggaactggc
aaggaactttttgcccagtcgatccacaacgccagtattcgtgccgaacaaccctttgtt
tccgtcaattgtggggccatcccccgggagctaattgccagtgagctttttggttatgag
gagggcgcttttaccggtgcccgtaaagggggcaatcccggtaagtttgaattagccgac
caggggacaatttttctggatgaaatcggtgaaatgcccctggatctccaggccgctcta
ctcagggtgttggaagaacaaagggtaatgcggttgggagggcgggaatatctcccggtc
aacgttagaatcattgctgccacaaacaaaaacctcctgaaagaggtggaaagggggacc
tttcgccgggatctattttaccgcctgaacgttatggttatatttctgccggcactgcgg
gaacgcagggaagacattgcattgttgaccaaccattttgtaaaacgtctcagtaaaaac
aagggtaaagacataaaaggggtttctcccgaagtaatggccatctttttaaactatcac
tggcccgggaatgttcgtgaattgcaaaatgtgctcgaacgtgcagttaacctttgtaca
ggaacagtgattacccccgacttactgccgccggagttaagtcagtacaacaattacatg
atttcccacaatctgacacccacaaaagaagaaagcaaattaattaaaaaggcggaagaa
caggccatccgcaactgtctggcccgatataaaagcaaaacaaaagcggctgaatatttg
ggcatttcccgggccaccctttaccggaaaattaaacaatacggtatcgagctggaacag
taa
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