Desulfofundulus kuznetsovii: Desku_3309
Help
Entry
Desku_3309 CDS
T01499
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dku
Desulfofundulus kuznetsovii
Pathway
dku03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desku_3309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dku03400
]
Desku_3309
DNA repair and recombination proteins [BR:
dku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desku_3309
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Desku_3309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HEM4
AAA_16
FlaG
AAA_22
Kinesin
P-loop_SecA
Microtub_bd
DegQ
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AEG16795
UniProt:
A0AAU8PT53
LinkDB
All DBs
Position
complement(3331075..3333117)
Genome browser
AA seq
680 aa
AA seq
DB search
MSYQERPFKLKSDFQPRGDQPRAIARLVEGLQKGYPMQTLLGVTGSGKTYTMAQVIQAVQ
RPTLVLAPNKTLAAQLCSEFREFFPENAVEYFISYYDYYQPEAYIPQTDTYIEKDSSIND
EIDKLRHSATCALFERRDVIIVASVSCIYGLGDPEEYRTLVLSLRKGGTYDRDAVLRKLV
EIQYERNDVNFTRGKFRVLGDVVEVFPASYTERAIRIDFFGDEIERLLEFDVLTGEIIGE
RQHMSIFPASHYTVSRPRMERAIAAIEAELEERLAELRKQGKLLEAQRLEQRTRYDIEMM
REMGYCKGIENYSRHLTGRAPGEPPYTLLDYFPQDFLLFIDESHVAVPQVRGMYEGDRSR
KAALVEYGFRLPSAFDNRPLKFEEFERKINQVIFVSATPGPYELERSSQVVEQIIRPTGL
VDPELSVRPTRGQIDDLVAEIRQRVAKNQRVLVTTLTKKMAEDLTDYLRELGIKVRYMHS
EINAIERMEIVRDLRLGVFDVLVGINLLREGLDLPEVSLVAILDADKEGYLRSERSLIQT
IGRAARNAEGKVILYADRITESMDRAIKETERRRRIQMEYNQKHGIIPRTVVKGVRDVIE
ATRVAEPKAAYQAKDKPRPKKRTRKELKQLIARLEKEMREAARHLEFEKAAELRDAIIEL
RLELQGLDRRLVPIGEVVGE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttaccaggagcgtcctttcaaactgaaatcggatttccagccccggggcgaccag
cccagggccattgcccggctggtggaagggctgcaaaagggctaccccatgcaaaccctt
ttgggtgtcaccggttccgggaagacctataccatggcccaggtaatccaggcggtacag
cgccccaccctggtgctggcccccaacaagaccctggccgcccagctctgcagcgagttc
cgggagttctttcccgagaacgcggtggaatactttatcagctattatgactattaccag
cccgaagcctatattccgcagacggatacctatatcgaaaaggattcctccatcaacgac
gagatagataagctgcgccactcggccacctgcgccctttttgagcggcgggacgtgatc
attgtagccagcgtatcctgcatctacggcctgggtgaccccgaggaataccgcaccctg
gtgctctccttgcgcaaggggggtacctatgaccgggatgcggtgctgcgcaagctggtg
gagatccagtacgagcgcaacgatgtgaacttcacccggggaaagttccgggtgctgggg
gatgtggtggaggtcttccccgcctcctacaccgaaagggccatccgtatcgatttcttc
ggggacgaaatcgagcggttgctggagttcgacgtgctcaccggggagatcatcggggaa
cgccagcacatgtccatcttcccggccagccactacaccgtttcccggccccgcatggaa
agggccatcgcggccattgaggccgaactggaggagaggctggccgagctgaggaaacag
ggcaaattgctggaggcccagcggctggaacagcggacccggtacgacatcgagatgatg
cgggagatgggttactgcaagggcattgagaactactcccgccacctgacgggccgggct
cccggggagccgccctataccctgctggactacttcccccaggacttcctgcttttcatt
gacgaatcccacgtggccgtgccccaggtgcgggggatgtacgagggtgaccgctcccgc
aaggcggccctggtggaatacggcttccgcctgccctcggcctttgacaaccggcctctc
aagtttgaggagttcgagcggaagatcaaccaggtcatcttcgtctccgccacccccggc
ccctatgaactggagcgcagcagccaggtggtggagcagatcatccggcccaccgggctg
gtggaccccgagctttcggtgcggcccacccggggccagatcgacgacctggtggcggag
atccggcagcgggtggccaaaaaccagcgggtgctggtgaccaccctgaccaagaaaatg
gccgaggatctcaccgactacctgcgggagctgggcatcaaggtgcgctacatgcactcg
gagatcaacgccatcgagcgcatggaaattgtgcgggacctgcgcctgggggtcttcgac
gtgctggtggggatcaaccttttgcgggagggcctggacctgcccgaggtcagcctggtg
gccatcctggatgccgacaaggagggctacctgcgctccgagcgctccctgatccagacc
atcggccgggccgcccgcaacgcggagggcaaggtgatcctctatgccgaccgcattacc
gagtccatggaccgggcaatcaaggaaacggaacgccggcgccggatccagatggaatat
aaccagaaacacggcattatcccccgcacggtggtcaagggggtgcgggacgtgattgag
gccacccgggtggcggagccaaaggccgcttaccaggccaaggataagccccggccgaag
aagcggaccaggaaagagctgaagcaattgattgcccgcctggaaaaggaaatgcgggaa
gccgcccgccatctggagttcgaaaaggcggcggagctgcgggatgcgatcatcgaattg
cggctggagctccagggcctcgacaggcgcctggtgcccataggggaagtggtgggggag
tag
DBGET
integrated database retrieval system
