Dyella kyungheensis: ACN9MB_03535
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Entry
ACN9MB_03535 CDS
T11335
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dky Dyella kyungheensis
Pathway
dky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9MB_03535 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dky03021
]
ACN9MB_03535 (rho)
03019 Messenger RNA biogenesis [BR:
dky03019
]
ACN9MB_03535 (rho)
Transcription machinery [BR:
dky03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACN9MB_03535 (rho)
Messenger RNA biogenesis [BR:
dky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN9MB_03535 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
FtsK_SpoIIIE
Mor
Motif
Other DBs
NCBI-ProteinID:
XRW11431
LinkDB
All DBs
Position
complement(835895..837643)
Genome browser
AA seq
582 aa
AA seq
DB search
MSDIESKDSNDAKSADAKPVAETRTRAPRKSAAAAAAERAEKQAQLDMPPLPPVERAAPP
AVESHAPASAPAADSASNDGGQRQPQEAREGGQQQNGQNGGNPNFNRNDRNDRDGRGRRR
RHERNQPRGPGGQGGGGGQQHARNNNGLPVDDEYADAGSNDRLINLTELKRKNALQLLEF
AESLGVQEGVARARKQDVVFNILKAHARSGGGIWAEGVLEILQDGFGFLRSADESYLAGP
DDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFAMLKVDDINGDPPEASKNKMLFENL
TPLFPRKAFKLERGNGSSEDITGRILDLVAPIGRGQRGLIVSQPKSGKTMMLQNIAQAIT
YNHPDAHLIMLLIDERPEEVTEIARTVRAEVISSTFDEPAVRHVQVAEMVIERAKRLVEH
KKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTII
ATALTDTGSKMDEVIYEEFKGTGNMEVHLSRRISEKRVYPAIDINRSGTRREDLLIEPDM
LSKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatatcgaaagcaaagattcaaacgacgccaagagcgccgacgccaagcctgtg
gctgaaacccgcacgcgtgcaccacgcaagtccgctgccgccgctgctgccgaaagggca
gaaaagcaggcccagttggacatgccgccgctgccgcccgtagaacgcgccgcaccgccc
gccgtcgaaagccacgcccccgcttccgcgccggccgccgactcggcgtccaacgacggt
ggccagcgccagccgcaggaagcccgcgagggcggccagcagcagaacggccagaacggc
ggcaacccgaatttcaaccgcaatgaccgcaacgaccgtgatggtcggggccgtcgtcgc
cgccacgagcgcaaccagccgcgcggccccggtggccagggcggcggtggcggtcagcag
cacgcccgcaacaacaacggcctgccggtggacgacgagtacgccgacgccggcagcaac
gaccgcctgatcaacctgaccgagctcaagcgcaagaatgcgctgcagctgctggaattc
gccgagtcgctcggcgtgcaggaaggcgtggcgcgtgcccgcaagcaggacgtggtgttc
aacatcctcaaggcgcatgcccgctccggcggcggcatctgggccgagggcgtgctggaa
atcctgcaggacggcttcggcttcctgcgctcggccgacgagtcctacctggccggtccg
gacgacatctacgtgtcgcccagccagatccgccgcttcaacctgcgcaccggcgactac
atcaccggtcgcgtgcgccacccgaaggaaggcgagcgctacttcgcgatgctcaaggtc
gacgacatcaacggcgatccgccggaggcgtcgaagaacaagatgctgttcgagaacctc
accccgctgttcccgcgcaaggctttcaagctcgagcgcggcaacggttccagtgaggac
atcaccggccgcatcctggacctggtggcgccgatcggccgcggccagcgtggcctgatc
gtctcgcagccgaagtccggtaagacgatgatgctgcagaacatcgcgcaggccatcacg
tacaaccatcccgacgcgcacctgatcatgctgttgatcgacgagcgtccggaagaagtg
acggaaatcgcccgcaccgtgcgtgccgaagtgatctcctccaccttcgacgagccggcc
gtgcgccacgtgcaggtggccgaaatggtgatcgagcgcgccaagcgcctggtcgagcac
aagaaggacgtggtgatcctgctcgactcgatcacccgcctggcccgtgcctacaacacc
gtggtgcccagctccggcaaggtgctcaccggtggtgtggacgccaacgccctgcagcgt
cccaagcgcttcttcggcgccgcgcgcaacgtggaagaaggcggcagcctgaccatcatc
gccaccgcgctgaccgacaccggcagcaagatggacgaggtgatctacgaagagttcaag
ggcaccggcaacatggaagtgcacctgagccgccgcatctccgagaagcgcgtgtacccg
gccatcgacatcaaccgctccggcacccgccgcgaggacctgctgatcgagccggacatg
ctttcgaagatctggatcctgcgcaagctgctgcatccgatggacgagctggccgcgatg
gagttcatgctcgacaagatgaagaacaccaagtccaacgacgagttcttcaattcgatg
aagcgctga
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