Dyella kyungheensis: ACN9MB_17370
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Entry
ACN9MB_17370 CDS
T11335
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dky Dyella kyungheensis
Pathway
dky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9MB_17370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dky03019
]
ACN9MB_17370 (recQ)
03400 DNA repair and recombination proteins [BR:
dky03400
]
ACN9MB_17370 (recQ)
Enzymes [BR:
dky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACN9MB_17370 (recQ)
Messenger RNA biogenesis [BR:
dky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN9MB_17370 (recQ)
DNA repair and recombination proteins [BR:
dky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACN9MB_17370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XRW09829
LinkDB
All DBs
Position
complement(3812486..3814303)
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AA seq
605 aa
AA seq
DB search
MPPSPLDILQSVFGYTQFRGPQQAIVDQLIEGGDALVLMPTGGGKSLCYQIPALVRQGTG
IVVSPLIALMQDQVDALREAGVSAAYLNSSLRAEDQREVERRLLAGELNLLYVAPERLLT
SRFLGLLESTEVALFAIDEAHCVSQWGHDFRPEYRELAVLHQRFPQIPRIALTATADQRT
RDEIVERLALQDARQFVSSFDRPNIRYQVGLRHNARRQLMEFLERHRGETGIVYALSRRK
VDETATWLMEAGIEALPYHAGLDAATRNANQRRFLREDGVVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDGLPSDAWMIYGLSDVVTMSQMIAQSESADERKRVERQK
LEAQLAYAETTQCRRELLLAAFGESFHGPCGHCDNCIEPPKTWDATVPAQKALSAVYRSG
QRFGSGHVISILRGEDSTRMSDLGHDRLSTFGIGADMDEKQWRSVFRQLLAMGLLEADAE
GFGTLRLSKASREVLVGNRPVRLREDATPARATRKRRRDSQLVTGGSLGVEAYEQPLWDE
LRKLRTQLAKQHGVPPYVIFHDATLLAMLRALPSNEAELSSISGVGEAKLKRYGRDFLAV
INASE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcccccctcacccctcgacattcttcaaagcgttttcggctacacccagttccgcggt
ccgcagcaggcgatcgtcgatcagttgatcgaaggtggcgatgcgctggtgctgatgcct
accggtggcggcaagtcgctttgctatcagattcctgccttggtgaggcagggcacgggt
atcgtggtgtcgccgctgatcgcgttgatgcaggatcaggttgatgcgctgcgcgaagcc
ggtgtttcagcggcctatctcaattccagcctaagggcggaagatcagcgcgaggtggag
cgccgtctgcttgccggcgagctgaacctgctttacgtcgcgccggaacggttgttgacc
tcgcgttttctcggtttgctcgagagcaccgaggtggcgttgtttgccatcgacgaagcg
cattgcgtatcgcaatgggggcacgatttccgtcctgagtatcgcgagctggcggtgttg
catcagcgctttccgcagattccgcggatcgcgctcaccgccacggccgatcaacgcacg
cgcgacgagatcgtcgagcggttggcgctgcaggatgcgcgccagttcgtgtcgagcttt
gaccggccgaacatccgctatcaggtcggtcttcgccacaacgcgcgacggcagttgatg
gagttcctggagcggcatcgcggcgagacgggcatcgtttatgcgctcagccggcggaag
gtggatgaaacggcgacgtggctgatggaagcgggtatcgaggcgttgccttatcacgcg
ggattggacgccgccacgcgcaacgcgaaccagcggcgtttcctgcgcgaagacggcgtg
gtgatggtggccacggtggcgtttgggatgggcatcgacaaacccgacgtgcgcttcgtg
gcgcatctggatctgccgcgtagcatggaaggttattaccaggagaccgggcgcgcgggt
cgcgacggcctgccttccgatgcgtggatgatttacggcctgtcggacgtggtgacgatg
agccagatgattgcgcagtccgaatcggcggatgagcgcaagcgggtggaacgccagaaa
ctggaagcgcaactggcgtacgcggaaaccacgcagtgccgtcgcgagctgttgctggcc
gcgttcggcgaatcgttccatgggccgtgcggccactgcgacaactgcatcgagccgccg
aagacgtgggatgccacggtgccggcgcagaaggcgctttcggcggtgtatcgcagcggc
cagcgcttcggctcgggccatgtcatcagcatcctgcgcggtgaggacagcacgcgcatg
agcgacctgggacacgatcgtctttccaccttcggcatcggcgccgacatggatgaaaag
caatggcgttcggtgtttcgccagttgctcgcgatgggcttgctggaggccgatgcggaa
ggctttggcacgctgcgcctgagcaaggcgagtcgcgaggtgctggtgggcaatcgtccg
gtgcgattgcgcgaggacgccacgccggcacgcgccacgcgcaagcgtcgtcgcgatagc
cagttggtgactggcggcagcctcggcgtggaggcttacgagcagccgctgtgggacgag
ttgcgcaagttgcgaacgcagctggcgaagcagcatggggtgccgccgtatgtgattttc
cacgatgcgacgctgctggcgatgttgcgtgcgttgccttcgaacgaggccgagctgtcg
tcgatcagtggggtgggtgaggcgaagctcaagcgctatgggcgggattttttggcggtg
attaacgctagcgagtag
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