Delftia lacustris: I6G47_02560
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Entry
I6G47_02560 CDS
T06974
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
dla
Delftia lacustris
Pathway
dla02020
Two-component system
dla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6G47_02560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6G47_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dla02022
]
I6G47_02560
Two-component system [BR:
dla02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
I6G47_02560
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
HTH_8
Mg_chelatase
AAA_2
AAA_16
AAA
HTH_23
AAA_22
APS_kinase
MCM
AAA_19
AAA_3
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
QPS81985
UniProt:
A0A7T2YUP0
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Position
complement(556175..557770)
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AA seq
531 aa
AA seq
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MNHVLIVDDDADSAATMRELVGVDRFSVAVAHTLRDARRQMAMQPPSLVLLDLQLPDGNG
MDLFGDRQVPQDSQIVLVTGHASLDSSIEALRRGAMDYLVKPVGIGRLEDILSRFLIPTP
GLSGADSRNGAGPASDQITAQDHCAPAGSYCAQEGRFGRLLGQSPPMQRLYQQMERVAGT
SVTVFLTGESGTGKEVVAQTLHDLSQRRSRPFLAVNCGAISPHLIESEIFGHEKGSFTGA
DRQHQGFFERAATGTLFLDEITEMPMELQVKLLRVLETGRFMRVGSTQTLQTDVRVIAAT
NRCPFEAVASGRLREDLLYRLNVFPIELPPLRERLSDVPLLAQHLLQAISQREGQTKQFT
ASALRQLAQHSWPGNVRELRNAVQRAYVMEPGPQVGTEWLPRPPVAIAQPAPMPVSLHAS
VHTSVPAQLAANAPQLPPTAQAAPVAVHPFADHGAAGDAYDLPDMEPATIQLPIGMTMAQ
AERLLIQATLKQCKYQKERTAAVLGISLKTLYNRLKDYAGGKKDRTDAEPG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgtgctgatcgtcgatgacgacgcggactcggcagccaccatgcgcgaactg
gtgggcgtggaccgcttttcggtcgccgtggcccacaccctgcgcgatgcgcgccgccag
atggccatgcagccgcccagcctggttcttctggacctgcagctgcccgatggcaacggc
atggacctgttcggcgaccggcaagtgccgcaggactcgcagatcgtgctggtgaccggc
catgccagcctggactcctccatcgaagccctgcgccgaggcgccatggactatctggtc
aagcccgtgggcataggccggctcgaggacattctttcgcgctttctcatccccacgccg
ggcctgtcgggcgcggacagccgcaacggcgcaggcccggcctccgatcagatcacggca
caagaccattgcgcacccgctggcagctactgcgcgcaggaaggccgctttggccggctc
ctgggccaatcgcctcccatgcagcgcctgtaccagcagatggagcgcgtggcgggcacc
tcggtcacggtgtttctcacgggagagagcggcaccggcaaggaggtcgtggcgcagacc
ctgcacgacttgagccagcggcgcagccgcccgtttcttgccgtgaactgcggcgccatt
tcgccgcatctcatcgaaagcgagatcttcggccacgaaaagggcagcttcacgggtgcc
gaccgccagcaccagggctttttcgagcgcgcggccacgggcacgctgttcctggacgag
atcacggaaatgcccatggagctgcaggtcaagctgctgcgcgtgctggagaccggccgc
ttcatgcgcgtgggctccacccagacgctgcagaccgatgtgcgcgtgatcgccgccacc
aaccgctgccccttcgaggccgtggccagcggcaggctgcgcgaggacctgctgtaccgg
ctgaacgtctttcccatcgagctgccgccgctgcgcgagcgcctgtccgacgtcccgctg
ctggcccagcacttgctgcaggccatctcccagcgagagggccagaccaagcagttcacg
gcgtcggccctgaggcagttggcgcagcacagctggcccggcaatgtgcgcgagctgcgc
aatgccgtgcagcgtgcctacgtcatggagcccggcccgcaggtaggcaccgaatggctg
ccccgcccaccggtggccattgcccagcccgcccccatgccggtgtcattgcacgcatcc
gtgcacacatccgtgcctgcgcagctggccgccaacgccccgcaattgccgcccactgcg
caggccgcgcctgtcgccgtgcatccgttcgccgaccacggcgcggcaggcgacgcctac
gacctgcccgatatggagccggccaccatacagctgcccatcggcatgaccatggcgcag
gccgagcggctgctgatccaggccacgctcaagcagtgcaagtaccagaaggaacgcacg
gccgccgtgctcggcatcagcctcaagacgctgtacaaccggctcaaggactatgcgggc
ggcaaaaaggacaggacggacgccgaacccggctga
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