Delftia lacustris: I6G47_02565
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Entry
I6G47_02565 CDS
T06974
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dla
Delftia lacustris
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dla03032
]
I6G47_02565
03400 DNA repair and recombination proteins [BR:
dla03400
]
I6G47_02565
Enzymes [BR:
dla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6G47_02565
DNA replication proteins [BR:
dla03032
]
Prokaryotic type
DNA Topoisomerases
I6G47_02565
DNA repair and recombination proteins [BR:
dla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6G47_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QPS81986
UniProt:
A0A7T2YUW3
LinkDB
All DBs
Position
complement(557933..558988)
Genome browser
AA seq
351 aa
AA seq
DB search
MPGWRRVRRGKGFSYVDQDGRPVRDAQALERIRKLAIPPAYVDVWICPDARGHLQATGRD
ARGRKQYRYHPQWQEQRKQVKFDRMREFGRHLPAIRRAVARDLRPGRPQLETVVATIVWL
LDCTALRVGNDEYSEANGSFGLTTLRNRHAQVRAGELTLSFKGKSGVAQQARVSDRAVAR
IVKRCQDLPGQRLFQFVDDEGDVHHVRSEHVNDYIRRICSKAGADEADGPDFSAKDFRTW
HASVYALELAMAAAASPAGSRHPGALTFTDLIAEVARRLGNTCTVCRKFYIHPQVLALCE
QPGQCPPAATAAPARRTRGLSAKECLFLGLLEPQPRRTPPRRGHGASRRPA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctggcgccgcgtgcggcgtggcaaaggcttttcctatgtggaccaggacggc
aggcccgtgcgcgacgcccaggcgctggagcgcatccgcaaattggccattccaccggcc
tatgtggatgtatggatctgccctgacgcccggggccacctgcaggccacgggccgcgat
gcccgcgggcgcaagcaataccgctatcacccgcagtggcaggagcagcgcaagcaggtc
aagttcgaccgcatgcgcgagttcggccggcatctgcccgccattcggcgtgccgtggcg
cgggacctcaggccggggcgtccgcagctcgaaaccgtggtggccaccatcgtctggctg
ctggactgcacggcgctgcgcgttggcaacgacgagtattcagaagccaatggatccttc
ggcctgaccacgctcaggaaccgccatgcccaggtgcgcgccggcgagctgacgctgagc
ttcaagggcaagagcggcgtcgcccagcaggcccgcgtgtccgaccgggccgtggcccgc
atcgtcaagcgctgccaggacctgccggggcagcggcttttccagttcgtggacgacgag
ggagatgttcaccatgtgcgctccgagcacgtgaacgactacatccgcaggatctgcagc
aaggccggggcagacgaggcagacggaccggacttcagtgccaaggacttccgtacctgg
catgccagcgtgtacgcgctggagctggccatggccgccgcagcgtcaccggcgggcagc
cgccatccgggcgcgctcaccttcacggacctcatcgccgaggtggcgcggcgcctgggc
aatacctgtacggtttgccgcaagttctacatccatccccaggtactggccctgtgcgag
cagcccggacaatgcccgcccgccgcgaccgctgcacccgcacggcgcacgcgcgggctg
agcgccaaggaatgcctgttcctgggcctgctggagccccagccccgccggaccccgccc
cgccgtggccatggcgccagccgccggcccgcctga
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