Delftia lacustris: I6G47_09195
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Entry
I6G47_09195 CDS
T06974
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dla
Delftia lacustris
Pathway
dla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G47_09195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dla03019
]
I6G47_09195
Enzymes [BR:
dla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G47_09195
Messenger RNA biogenesis [BR:
dla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G47_09195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPS83225
UniProt:
A0A7T2YW26
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All DBs
Position
2030686..2032482
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AA seq
598 aa
AA seq
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MTFEELNLAPAILKAVLEEGYENPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPML
HRLSQGQVPRNKFGGKGIRALVLTPTRELAAQVEESVRSYAKYLDINSTVIFGGVGMKPQ
IDRIKKGVDILVATPGRLLDLQQQGFMDLSTVEVLVLDEADRMLDMGFIHDVKKVLALVP
KEKQSLLFSATFSDEIRDLANGLLRNPQSIQVTPSNTTVQRITQVIHPVGRGKKKQVLLH
IINENNWSQVLVFTRTKFGANNVAEFLTKNNISAMALHGNKSQSARTQALAGFKTGELRA
LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMM
DIERFTKQEIPVQVLEGFGPEEGEVAEPIAMGRQTIWGGAGKPPSRDVMQAAAKAARQEM
MDRIRTNKAAQPDRGGRAGGRGQAAPKAGSDEGRSEGSAGGQGRGRNHAGAGANNKPRRD
RFDGPGNGSGAAHRPKAGPQNAPRRGPRPDGEGGGGRRFDDQPPRADAHLGTQLGHARSS
GPRGGAGGGQPDPMRTSVDTMAERGRRGGGGFNRGGGGGGGGFGGGGRGGSSRGGYGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagaactgaatctggctcccgccattctgaaggccgtgcttgaggagggt
tacgagaacccgactcccatccaggcacaggccattccggcggtgctcgccggccacgac
ctgctggcaggcgcccagaccggcaccggcaagaccgcggccttcaccctgcccatgctg
caccgcctctcgcaaggccaggtgccgcgcaacaagttcggcggcaagggcatccgcgcc
ctggtgctgacgcccacgcgtgaactcgcagcgcaggtcgaggaatcggtgcgcagctac
gcgaagtacctggacatcaactccaccgtcatcttcggcggcgtgggcatgaagccccag
atcgaccgcatcaagaagggcgtggacatcctggtcgccacgccgggccgcctgctggat
ctgcagcagcaaggcttcatggacctgtccaccgtcgaagtcctggtgctcgacgaagcc
gaccgcatgctggacatgggcttcatccacgacgtcaagaaggtgctggccctggtgccc
aaggaaaagcaaagcctgctgttctcggccaccttcagcgacgagatccgcgacctggcc
aacggcctgctgcgcaatccgcagtccatccaggtcacgcccagcaacaccaccgtgcag
cgcatcacccaggtgatccaccccgtgggccgcggcaagaaaaagcaggtgctgctgcac
atcatcaacgagaacaactggagccaggttctggtgttcacgcgcaccaagttcggcgcc
aacaacgttgccgaattcctgaccaagaacaacatcagcgccatggcgctgcacggcaac
aagagccagagcgcacgcacccaggcactggccggcttcaagaccggcgagctgcgcgca
ctggtggccaccgacatcgctgcacgcggcatcgacatcgatgagctgccgcacgtcgtg
aactacgaaatccccaacgtctccgaagactacgtgcaccgcatcggccgcacgggccgt
gccgggcgcgaaggccatgccgtcagcctcgtgtgcatggacgaagaaggcttcatgatg
gacatcgagcgcttcaccaagcaggaaatccccgtgcaggtgctcgaaggcttcggcccg
gaagaaggcgaagtggccgaacccatcgccatgggccgccagaccatctggggcggcgcg
ggcaagccgcccagccgtgacgtcatgcaggccgccgccaaggccgcgcgccaggaaatg
atggaccgcatccgcaccaacaaggctgcccagcccgaccgcggcggtcgtgcaggcggc
cgtggccaggcagcacccaaggcaggctcggacgaaggccgctccgaaggcagcgcaggc
ggccagggccgtggccgcaaccacgccggcgcaggcgccaacaacaagccgcgccgcgac
cgcttcgacggtccgggcaacggctccggcgctgctcaccgccccaaggcaggtccccag
aacgccccccgtcgcggcccgcgtcctgacggcgaaggcggcggtggccgtcgcttcgac
gaccagcccccgcgcgctgatgcccacctgggcacgcagctcggccatgcacgcagcagc
ggaccgcgcggcggcgccggcggcggccaacccgacccgatgcgcaccagcgtggacacc
atggccgaacgcggccgccgcggcggcggtggtttcaaccgcggtggcggcggcggcggt
ggtggcttcggcggcggtggccgtggcggctcctcgcgcggcggctacggtcgctga
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