Delftia lacustris: I6G47_13770
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Entry
I6G47_13770 CDS
T06974
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dla
Delftia lacustris
Pathway
dla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G47_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dla03019
]
I6G47_13770
Enzymes [BR:
dla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G47_13770
Messenger RNA biogenesis [BR:
dla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G47_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QPS84055
UniProt:
A0A7T2YYF1
LinkDB
All DBs
Position
complement(2946279..2947775)
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AA seq
498 aa
AA seq
DB search
MTSSFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLP
LLQRLMRHENASASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMK
PQTLELKKGVEVLVATPGRLLDHIEAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSH
LPKTRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFYSVSDDDKRYAL
RSLLKQREIRQAFVFSNSKLGCARLTRALERDGLRATALHGDKSQDERLKALEAFKRGEV
DLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGIAVTLVTNHDARL
VGEIEKLIKKKINVETCPMEDFRGSAPRGHRFDELPRQGAGGGYGRERDRGGERGDRGAD
AARGSTGFGHRGSRMAQRPAHSDPFFDKPYEPSASADANWESQRAAPKAGGNIKPKRKLA
ALFKAPVAPAAPVATSEV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctctttctccaatctccaactggccgagtccctggcgcgcgccgtggccgac
atgggctacgagtccatgacgcccatccaggcgcaggccattccggttgttctgaccggc
aaggatgtcatgggcgcagcccagaccggcacgggcaagacggcagcgttctcgctgccg
ttgctgcagcggctgatgcgccacgaaaatgcctccgcttcgcctgcacggcaccccgtg
cgggcgttggtgcttttgcccacgcgcgaactggcggaccaggtggctcagcagatcgcc
cagtacgccaagtacaccaagctgcgcagcaccgtggtgttcggtggcatggacatgaaa
ccgcagacgctggaactgaaaaagggcgtcgaggtgctggtggccacgccgggccggctg
cttgaccatatcgaagccaagaacgtggtgctcaaccaggtcgagtacgtggtgctcgac
gaggcggaccgcatgctggacatcggcttcctgcccgacctgcagcgcatcctgtcccat
ctgcccaagacacgcaccaccttgctgttcagcgccaccttctcgcccgagatcaagcgc
ctggccggcagctacctgcaagaccccgtcaccatcgaagtggcccgtcccaacgagacg
gcgtccacggtggagcagcgcttctacagcgtcagcgacgacgacaagcgctatgcgctg
cgttcgctgctcaagcagcgcgagatccgccaggccttcgtcttttccaacagcaagctg
ggctgcgcccgcctgacgcgtgccctggagcgtgatggcctgcgcgcaacggcgctgcac
ggcgacaagagccaggacgagcgcctgaaggcgcttgaagccttcaagcgcggcgaggtc
gatctgctggtgtgtaccgatgtcgcggcccgcggcctggacatcaaggacgtgccggcc
gtcttcaactacgacgtgcccttcaacgccgaagactatgtgcaccgcatcggccgcacg
ggccgcgcaggcgcctccggcattgccgtgaccctggtgaccaaccacgatgcgcgcctg
gtgggcgagatcgagaagctcatcaagaagaagatcaacgtcgaaacctgccccatggaa
gatttccgcggcagcgcaccgcgtggtcaccgtttcgacgagctgccgcgccaaggcgct
ggcggcgggtacggtcgtgaacgggatcgcggcggcgagcgtggcgatcgcggtgccgat
gccgcccggggcagcacgggcttcggccatcgcggctcgcgcatggcccagcgcccggcg
cattccgaccccttcttcgacaagccctatgagccttcggccagcgccgacgccaactgg
gaaagccagcgcgctgcgcccaaggccggcggcaacatcaagcccaagcgcaagctggcg
gcgctgttcaaggcaccggtcgcgcccgccgcgcccgtcgccacctccgaggtctga
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