Delftia lacustris: I6G47_17135
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Entry
I6G47_17135 CDS
T06974
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dla
Delftia lacustris
Pathway
dla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6G47_17135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dla02022
]
I6G47_17135
02035 Bacterial motility proteins [BR:
dla02035
]
I6G47_17135
Two-component system [BR:
dla02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
I6G47_17135
Bacterial motility proteins [BR:
dla02035
]
Pilus system
Twitching motility proteins
I6G47_17135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
HTH_28
AAA_16
PDE8A_N
HTH_30
AAA
CBP30
HTH_24
VpsR
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QPS78753
UniProt:
A0A1H3QBC8
LinkDB
All DBs
Position
3645041..3646555
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AA seq
504 aa
AA seq
DB search
MPLNSLPAAASILVVDDEPDLRTLYELTLLREGYRVETAASVGEAREQLQTQRFDVVITD
MRLPDGMGMELLQDLRNQQRRERCVVMTAYGSAENAVEALRSGAFDYLTKPVDLKQFRLV
VASAAQGVGGVPPPGVMPARSPSAASAASPVLSGGGALDAMVGESPAMQAVKQRIAKVAR
GMAPVLVHGESGTGKELVARALHACSQRAHGPMVAVNCGAIPENLLEAEFFGARKGSYTG
ATQDRDGYFQAARGGTLFLDEIGDLPLPMQAKLLRAIQERRVRPLGSAQEEAADVRIVSA
THRDLAADVQAGRFRQDLYYRLNVIEVLLPPLRERREDLPALCRALLARLSQESGLPMPE
IDERSLEQIARLPLPGNVRELENLLHRAITLGEEGPLRIDPEMQLPCGTPPAPPASAQTQ
AHDGAAPPPEPADMELPRDLQAWLDERERGILVQALQENGFNRTATAARLGLSLRQIRYR
IDRLNIALPGDASAEADGGGHGEA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgaactccctgcccgctgccgcatcgattcttgtcgtggacgacgagccggat
ctgcgcaccctctatgaactgaccctgctgcgcgaaggctaccgcgtggaaaccgccgcc
agcgtgggcgaggcgcgcgaacagctgcagacccagcgcttcgacgtggtcatcaccgac
atgcgcctgcccgacggcatgggaatggagctgctgcaggacctgcgcaaccagcagcgg
cgagaacgctgcgtggtcatgaccgcctacggctcggccgaaaatgccgtcgaagccctt
cgctcgggcgccttcgactatctgaccaagcccgtggacctcaagcagttccgcctggtc
gtggcctcggccgcccagggcgtgggcggcgtgccgccccccggcgtgatgccggcgcgc
agcccctcggcggcgtcggccgcaagccccgtgctcagcggcggcggggcgctcgacgcc
atggttggggagtcgcccgccatgcaggccgtcaagcagcgcattgccaaggtggcgcgc
ggcatggcgccggtgctggtgcacggcgagtcgggcacgggcaaggagctggtggcgcgc
gccctgcacgcctgcagccagcgcgcccacggccccatggtggccgtgaactgcggcgcc
atccccgaaaacctgctggaggccgagttcttcggcgcccgcaagggctcctataccgga
gccacccaggaccgcgacggctatttccaggcggcacgcggcggcaccctgttcctcgac
gaaatcggcgacctgccgctgcccatgcaggccaagctgctgcgcgccatccaggaacgc
cgcgtgcgccccctgggctcggcgcaggaggaagcggccgacgtgcgcatcgtcagcgcc
acccaccgcgacctggccgccgacgtgcaggcaggacgttttcgccaggacctgtactac
cgcctcaacgtcatcgaagtacttcttccgccgctgcgcgagcgccgcgaagacctgccc
gcgctgtgccgtgcattgctggcacggctgtcgcaggagtcgggcctgcccatgcccgag
atcgacgagcgttccctggagcagatcgcccgcctgcccctgcccggcaatgtgcgtgaa
ctggagaacctgctgcaccgcgccatcacgctgggcgaggaagggccgctgcgcatagac
cccgagatgcagctgccctgcggcactccgccggctccacccgcatcggcgcagacccag
gcgcacgacggcgccgcaccgccgccggagcctgccgacatggagctgccccgcgacctg
caggcctggctggacgagcgcgagcgcggcatcctggtgcaggcgctgcaggaaaacggc
ttcaaccgcacggccacggccgcacgcctggggctgagcctgcgccagatccgctaccgc
atcgaccggctgaacatcgccctgcctggcgacgccagcgccgaggcggacggaggcggc
catggcgaagcctga
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