Delftia lacustris: I6G47_20150
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Entry
I6G47_20150 CDS
T06974
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dla
Delftia lacustris
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dla03400
]
I6G47_20150 (sbcD)
DNA repair and recombination proteins [BR:
dla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6G47_20150 (sbcD)
Archaeal homologous recombinant proteins
I6G47_20150 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Ubiq-Cytc-red_N
Motif
Other DBs
NCBI-ProteinID:
QPS79328
UniProt:
A0A7T3DDB7
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All DBs
Position
4306086..4307363
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AA seq
425 aa
AA seq
DB search
MRLLHTSDWHLGQHFMGKSRQAEHAALIDWLLEQVDAQAVDAVLIAGDIFDTGAPPSYAR
ELYSQLVVRLHAAGVALLLLGGNHDSVATLAESRELLACLDTTVVAAVGETASHVVELPL
RRRPGQPAMPGCIVCALPFMRPRDVMLSQAGQSAEQKQQALQAAIEACYRNVHDAAIARR
DALAATRGERLPIVATGHLTTVGASSSESVREIYVGSLDAFPTSAFPPADYVALGHIHQP
QKVGDLEHIRYSGSPIALSFDEARQSKQMLLVDLGPEGLQAVTPLPVPCFQPMASVAGSL
TALPDLMRATAQAGSPARPVWLEVVVEQDDYLLQLTDRVQALADELPVELLRVRRQRGRA
VAGMAAAAGESLHEISPADVFERRLALETLEPGLAQALTRRYQEVVAGLDASHPGAGEHG
EEARA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttcttcacacttccgactggcacctgggccagcacttcatgggcaagagccgc
caggcagagcacgctgcgctcatcgactggctgctggagcaggtcgatgcccaggcggtg
gatgccgtgctcatcgcgggcgatatcttcgacaccggcgcgccgcccagctatgcgcgc
gagctgtacagccagctcgtggtgcgcctgcacgcggcgggcgtggccctgctgctgctg
ggcggcaaccatgactccgtggccacgctggccgaaagccgcgagctgctggcctgcctg
gacaccaccgtggtggccgccgtgggcgagacggccagccacgtggtggagttgccgctg
cggcgccggccgggccagcctgccatgcctggctgcatcgtctgcgccctgcccttcatg
cgcccgcgcgacgtgatgctgagccaggcgggccaaagcgccgagcaaaaacagcaggcg
ctgcaggccgccatcgaggcctgctaccgcaacgtgcacgacgccgccatcgctcgccgt
gatgcgctggccgccacacgcggcgagcgcctgcccatcgtcgccacgggccacctcacc
accgtgggcgccagcagcagcgagtccgtgcgcgaaatctatgtgggctcgctggacgcc
ttccccacctcggcctttccgcccgccgactacgtggccctgggccacatccaccagccg
cagaaagtgggcgacctggagcacatccgatacagcggctcgcccattgcgctgagcttt
gacgaggcccgccagtccaagcagatgctgctggtggacctgggccccgaagggctgcag
gccgtcacgccgctgcccgttccctgctttcagcccatggcctcggtggcaggcagcctg
accgccttgccggatctgatgcgcgccaccgcccaggccggcagccctgcacggcccgtg
tggttggaggtggtggtggagcaggacgactacctgctccagctcaccgaccgcgtgcag
gccttggccgacgagctgccggtggagctgctgcgcgtgcggcgccagcgcggccgggcg
gtggccggcatggccgccgccgctggcgagtcgctgcacgagatcagccccgccgacgtc
ttcgagcgccgcctggcgctggaaacactggagcctggcctggcccaggccctcacccgg
cgctaccaggaggtggtggccgggcttgatgcgtcccacccaggcgccggcgaacacggc
gaggaggcccgcgcatga
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