KEGG   Delftia lacustris: I6G47_23210
Entry
I6G47_23210       CDS       T06974                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
dla  Delftia lacustris
Pathway
dla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    I6G47_23210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dla03400]
    I6G47_23210
DNA repair and recombination proteins [BR:dla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I6G47_23210
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      I6G47_23210
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_16 SMC_N AAA_29 nSTAND1 DnaJ_CXXCXGXG DUF4350 AAA_33 YmcF-like
Other DBs
NCBI-ProteinID: QPS79897
UniProt: A0A1H3TW80
LinkDB
Position
4989006..4991780
AA seq 924 aa
MSLPSPSSESAKAPAAAPAHHDPTAVTHPTDGCIRVRGAREHNLKNVDVVIPRNCLVVFT
GVSGSGKSSLAFGTLYAEAQRRYFESVAPYARRLIDQVGVPQVDGIDGLPPAVALQQHRG
APTARSSVGSVTTLSNLVRMLYSRAGAYPAHQPMLYAEDFSPNTPQGACPHCHGLGRLYD
VTEASMVPDDSLTVRERAVAAWPSAWQGQNLRDILTTLGHDIDVPWRNLPRKTREWILFT
DEQPTVPVYPGLTVDEARRARQAGQPPSYMGTFTGARRYVMQTFATSQSAMMKRKVSKFM
VGTRCPVCHGKRLKPESLSVTFCGLDIGDLARLPLDALADVLRPVAEGATTPTVTGDAGA
AMTAAARKRAALQRKADGACAHAAAPDVRRTPHLSPEKQLAAQRIAQELLVRVQALTGLG
LGYLSLDRATPTLSPGELQRLRLATQLASQLFGVVYVLDEPSAGLHPADTASLLTALQRL
KDAGNSIFVVEHDVTTMQRADWLVDVGPGAGERGGRVLYSGPPEGLAEISESQTRRYLFE
DGTRSRRERRTLNPENRTQGWLTLQGVHRHNLRGVDVAFPTACLTAVTGVSGSGKSSLVS
QVLLELVTAHLGQPLASSEGESLADGPPDATADGDDPVSIRMTNEGATTSGRLGGATDHV
RRLVRVDQQPIGRTPRSNLATYTGLFDAVRKLFAATPAARKRRYDAGRFSFNVAKGRCST
CEGEGFVSVELLFLPSVYAPCPTCHGARYNSDTLSITWNGLSIADVLGLTVDAACEAFAA
EPAVLRPLHALRDIGLGYLRLGQPATELSGGEAQRIKLATELQRTQRGHTLYVLDEPTTG
LHPADVDRLLLQLDALVQAGNTVVVVEHDMHFVASSDWVIDIGPGAGAQGGHIVATGTPH
QVASCTASRTARYLAAALNNTIAN
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtctcttccatccccctcttcagaatctgcgaaggctcctgcagccgctcctgcgcac
cacgatcccacggcagtgacccaccccaccgatggctgcattcgtgttcgtggcgcgcgc
gagcacaacctgaagaacgtggatgtggtgattccacgcaactgccttgtggtcttcacc
ggggtgtccggctcgggcaagtcgtcgctcgccttcggcaccttgtatgccgaggcgcag
cgccgatacttcgaatcggtcgcgccctatgcgcgcagactcatcgaccaggtgggcgtt
ccgcaggtcgatggcatcgatggtctgccccctgcagtggctctgcagcagcatcgtggc
gcacccacggcgcggtcatcggttggcagcgtcaccactctttcgaacctggtgcgcatg
ctttactcgcgtgctggagcgtaccccgcgcaccaacccatgctgtatgcggaggatttt
tcacccaacaccccgcagggcgcctgcccgcattgccatggactgggccgtctttacgac
gtgacagaggcgtccatggtgccggatgattcgctcaccgtgcgcgagcgggccgttgcc
gcctggccaagcgcttggcagggccaaaatctgcgcgacattctcacaacgctgggccac
gacatcgacgtgccttggcgcaatttgccgcgcaagacacgcgaatggatccttttcacc
gacgagcagcccaccgtgccggtgtacccgggactcacggttgacgaggctcggcgcgcg
cgccaagcgggccagccgcccagctacatgggcacgttcaccggcgcacgccgctatgtg
atgcagacatttgccaccagccagagcgcgatgatgaagcgcaaggtgtccaagttcatg
gtggggacgcgctgcccagtctgccatggcaagcggctgaagcccgagtcgctttcggtc
accttttgcggtctggacattggcgatctggctcgcctgccccttgacgccttggccgat
gtgctccgacctgtggccgagggcgcgaccactccaaccgtgacgggcgatgccggtgct
gccatgactgctgctgcgcgcaagcgcgccgcacttcaacggaaggcggacggcgcctgc
gcccatgctgccgcacccgatgtgcgccgcacgccccacctctcgcccgaaaagcagctg
gctgcacagcgcatcgctcaggaactgctggtccgcgtgcaggccctgaccgggctgggg
ctgggttacctctcgctcgaccgggcgacgcccacgctgtcacccggcgagctgcagcgc
ctgcggctggccacgcagttggcatcgcaactcttcggcgtggtgtatgtgttggacgag
ccgtctgccggactgcacccggccgacaccgcttcgctgctgactgcgctgcaacgcttg
aaggacgctggcaattccatcttcgtggtcgagcatgacgtgaccaccatgcagcgcgca
gactggctggtggatgtaggccccggggccggcgagcgtgggggtcgcgtcctctacagc
ggcccgcccgaaggcctcgcagagatatccgagtcgcagacgcgtcgctacctgttcgag
gacggcacgcgttcacgccgcgaacggcgcaccctcaaccccgaaaatcgaactcagggt
tggctgacgctgcagggtgtacatcgccacaatctgcgtggcgtcgacgtggcgttccct
acagcgtgcctgactgccgtaaccggcgtctccggctcgggcaaatcgagcctggttagc
caagtactgctggagttggtcaccgcccacttggggcagccccttgcgtcgagtgaaggt
gaaagcctggccgacgggccgcctgatgccacagcggacggcgatgacccggtatccatc
aggatgacaaatgaaggcgccactacttcaggccgacttggcggggccacagaccacgtt
cgccggcttgtgcgcgtggaccagcaaccgatcggccgtacgccccgctccaaccttgcc
acctataccggcctgtttgatgccgtgcgcaagctcttcgcagctacaccggcagcgcgt
aaaagacgctatgacgcgggccgcttttcgttcaacgtcgccaaaggccgctgttccacc
tgcgagggcgaaggcttcgtgagcgtcgaactgctttttctgcccagcgtgtacgcgccg
tgtcccacctgccacggcgcgcgttacaactccgacacactgtccatcacatggaacgga
ctcagcatcgccgatgtacttggcctcacggtggacgctgcctgcgaggcgtttgccgcc
gagcctgccgtgctgaggccgctgcatgcgctgcgcgacattgggctgggctatttgcgt
ctgggccagcccgcgacagagctgtcagggggtgaagcccagcgcatcaaacttgccacc
gagctacagcgtacccagcggggccataccctgtacgtactggacgaacctacgacgggc
ctgcatccggccgacgtggaccgcctgttgctgcagctggacgcactggtccaggctggc
aataccgtcgtggtggtcgaacatgacatgcacttcgttgcctccagcgattgggtgatc
gatatcggtcctggtgcgggtgcacaaggtggacacatcgtagcgactgggacaccgcat
caggtggcaagttgcaccgcctcgcgcacggcacggtatctggcggccgcattgaacaac
accatcgcaaactga

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