Delftia lacustris: I6G47_23210
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Entry
I6G47_23210 CDS
T06974
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
dla
Delftia lacustris
Pathway
dla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6G47_23210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dla03400
]
I6G47_23210
DNA repair and recombination proteins [BR:
dla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6G47_23210
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G47_23210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_16
SMC_N
AAA_29
nSTAND1
DnaJ_CXXCXGXG
DUF4350
AAA_33
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
QPS79897
UniProt:
A0A1H3TW80
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Position
4989006..4991780
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AA seq
924 aa
AA seq
DB search
MSLPSPSSESAKAPAAAPAHHDPTAVTHPTDGCIRVRGAREHNLKNVDVVIPRNCLVVFT
GVSGSGKSSLAFGTLYAEAQRRYFESVAPYARRLIDQVGVPQVDGIDGLPPAVALQQHRG
APTARSSVGSVTTLSNLVRMLYSRAGAYPAHQPMLYAEDFSPNTPQGACPHCHGLGRLYD
VTEASMVPDDSLTVRERAVAAWPSAWQGQNLRDILTTLGHDIDVPWRNLPRKTREWILFT
DEQPTVPVYPGLTVDEARRARQAGQPPSYMGTFTGARRYVMQTFATSQSAMMKRKVSKFM
VGTRCPVCHGKRLKPESLSVTFCGLDIGDLARLPLDALADVLRPVAEGATTPTVTGDAGA
AMTAAARKRAALQRKADGACAHAAAPDVRRTPHLSPEKQLAAQRIAQELLVRVQALTGLG
LGYLSLDRATPTLSPGELQRLRLATQLASQLFGVVYVLDEPSAGLHPADTASLLTALQRL
KDAGNSIFVVEHDVTTMQRADWLVDVGPGAGERGGRVLYSGPPEGLAEISESQTRRYLFE
DGTRSRRERRTLNPENRTQGWLTLQGVHRHNLRGVDVAFPTACLTAVTGVSGSGKSSLVS
QVLLELVTAHLGQPLASSEGESLADGPPDATADGDDPVSIRMTNEGATTSGRLGGATDHV
RRLVRVDQQPIGRTPRSNLATYTGLFDAVRKLFAATPAARKRRYDAGRFSFNVAKGRCST
CEGEGFVSVELLFLPSVYAPCPTCHGARYNSDTLSITWNGLSIADVLGLTVDAACEAFAA
EPAVLRPLHALRDIGLGYLRLGQPATELSGGEAQRIKLATELQRTQRGHTLYVLDEPTTG
LHPADVDRLLLQLDALVQAGNTVVVVEHDMHFVASSDWVIDIGPGAGAQGGHIVATGTPH
QVASCTASRTARYLAAALNNTIAN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccatccccctcttcagaatctgcgaaggctcctgcagccgctcctgcgcac
cacgatcccacggcagtgacccaccccaccgatggctgcattcgtgttcgtggcgcgcgc
gagcacaacctgaagaacgtggatgtggtgattccacgcaactgccttgtggtcttcacc
ggggtgtccggctcgggcaagtcgtcgctcgccttcggcaccttgtatgccgaggcgcag
cgccgatacttcgaatcggtcgcgccctatgcgcgcagactcatcgaccaggtgggcgtt
ccgcaggtcgatggcatcgatggtctgccccctgcagtggctctgcagcagcatcgtggc
gcacccacggcgcggtcatcggttggcagcgtcaccactctttcgaacctggtgcgcatg
ctttactcgcgtgctggagcgtaccccgcgcaccaacccatgctgtatgcggaggatttt
tcacccaacaccccgcagggcgcctgcccgcattgccatggactgggccgtctttacgac
gtgacagaggcgtccatggtgccggatgattcgctcaccgtgcgcgagcgggccgttgcc
gcctggccaagcgcttggcagggccaaaatctgcgcgacattctcacaacgctgggccac
gacatcgacgtgccttggcgcaatttgccgcgcaagacacgcgaatggatccttttcacc
gacgagcagcccaccgtgccggtgtacccgggactcacggttgacgaggctcggcgcgcg
cgccaagcgggccagccgcccagctacatgggcacgttcaccggcgcacgccgctatgtg
atgcagacatttgccaccagccagagcgcgatgatgaagcgcaaggtgtccaagttcatg
gtggggacgcgctgcccagtctgccatggcaagcggctgaagcccgagtcgctttcggtc
accttttgcggtctggacattggcgatctggctcgcctgccccttgacgccttggccgat
gtgctccgacctgtggccgagggcgcgaccactccaaccgtgacgggcgatgccggtgct
gccatgactgctgctgcgcgcaagcgcgccgcacttcaacggaaggcggacggcgcctgc
gcccatgctgccgcacccgatgtgcgccgcacgccccacctctcgcccgaaaagcagctg
gctgcacagcgcatcgctcaggaactgctggtccgcgtgcaggccctgaccgggctgggg
ctgggttacctctcgctcgaccgggcgacgcccacgctgtcacccggcgagctgcagcgc
ctgcggctggccacgcagttggcatcgcaactcttcggcgtggtgtatgtgttggacgag
ccgtctgccggactgcacccggccgacaccgcttcgctgctgactgcgctgcaacgcttg
aaggacgctggcaattccatcttcgtggtcgagcatgacgtgaccaccatgcagcgcgca
gactggctggtggatgtaggccccggggccggcgagcgtgggggtcgcgtcctctacagc
ggcccgcccgaaggcctcgcagagatatccgagtcgcagacgcgtcgctacctgttcgag
gacggcacgcgttcacgccgcgaacggcgcaccctcaaccccgaaaatcgaactcagggt
tggctgacgctgcagggtgtacatcgccacaatctgcgtggcgtcgacgtggcgttccct
acagcgtgcctgactgccgtaaccggcgtctccggctcgggcaaatcgagcctggttagc
caagtactgctggagttggtcaccgcccacttggggcagccccttgcgtcgagtgaaggt
gaaagcctggccgacgggccgcctgatgccacagcggacggcgatgacccggtatccatc
aggatgacaaatgaaggcgccactacttcaggccgacttggcggggccacagaccacgtt
cgccggcttgtgcgcgtggaccagcaaccgatcggccgtacgccccgctccaaccttgcc
acctataccggcctgtttgatgccgtgcgcaagctcttcgcagctacaccggcagcgcgt
aaaagacgctatgacgcgggccgcttttcgttcaacgtcgccaaaggccgctgttccacc
tgcgagggcgaaggcttcgtgagcgtcgaactgctttttctgcccagcgtgtacgcgccg
tgtcccacctgccacggcgcgcgttacaactccgacacactgtccatcacatggaacgga
ctcagcatcgccgatgtacttggcctcacggtggacgctgcctgcgaggcgtttgccgcc
gagcctgccgtgctgaggccgctgcatgcgctgcgcgacattgggctgggctatttgcgt
ctgggccagcccgcgacagagctgtcagggggtgaagcccagcgcatcaaacttgccacc
gagctacagcgtacccagcggggccataccctgtacgtactggacgaacctacgacgggc
ctgcatccggccgacgtggaccgcctgttgctgcagctggacgcactggtccaggctggc
aataccgtcgtggtggtcgaacatgacatgcacttcgttgcctccagcgattgggtgatc
gatatcggtcctggtgcgggtgcacaaggtggacacatcgtagcgactgggacaccgcat
caggtggcaagttgcaccgcctcgcgcacggcacggtatctggcggccgcattgaacaac
accatcgcaaactga
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