KEGG   Delftia lacustris: I6G47_24015
Entry
I6G47_24015       CDS       T06974                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
dla  Delftia lacustris
Pathway
dla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I6G47_24015 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dla03400]
    I6G47_24015 (xth)
Enzymes [BR:dla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     I6G47_24015 (xth)
DNA repair and recombination proteins [BR:dla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     I6G47_24015 (xth)
SSDB
Motif
Pfam: Exo_endo_phos DUF5648 Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QPS80045
UniProt: A0A1H3PU16
LinkDB
Position
complement(5149003..5149806)
AA seq 267 aa
MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY
AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPSRKLSIISAYFPSGSSG
ELRQTAKFRFLAEMHAHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEERE
WMTKLLNKTEPTGGLVDVYRLLQPDTTDTCYTWWSNRGQAYANNVGWRLDYHLATPATAA
LARTENIYKDVKFSDHAPVTIGYDMKL
NT seq 804 nt   +upstreamnt  +downstreamnt
ttgttcaaattgaccagcctcaacctcaacggcatccgctcggcctcgaccaagggcgtc
gaagcctggatcgaggccactgcgccggattgtatttgcgtgcaggaaatcaaggcccag
gccgccgacatgaccggacgcttcgagctgctggccggcctgcgcggccacttccactac
gccgagaaaaagggctactcgggcgtgggcgtctacagccgccacgagcccagcgacgtc
gtggtcggcttcggctcgcacgaattcgacgccgaaggccgctacgtggaggcgcgcttc
gacacgccatctcgcaagctgtccatcatcagcgcctactttcccagcggcagctccggc
gaactgcgccagacggccaagttccgcttcctggccgaaatgcacgcccacctgatgcgc
atgaagggcgaacgcgagttcatcctctgcggcgacatcaacatcgcccaccagcagatc
gacctcaagaactggcgcagcaaccagaaaaacagcggtttcacgcccgaggaacgcgag
tggatgacaaaattgttgaacaaaactgagccgactggcggcctggtggacgtttatcgc
ctgctccagcccgacaccaccgacacctgctacacatggtggagcaaccgcggccaggcc
tacgccaacaacgtgggatggcgcctggactaccacctggccacccccgctaccgccgcg
ctggcccgcaccgagaacatctacaaggatgtgaagttctcggaccatgcgccggtgacc
atcggctacgacatgaagctgtga

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