Delftia lacustris: I6G47_26575
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Entry
I6G47_26575 CDS
T06974
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dla
Delftia lacustris
Pathway
dla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I6G47_26575
09124 Replication and repair
03420 Nucleotide excision repair
I6G47_26575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dla03021
]
I6G47_26575
03036 Chromosome and associated proteins [BR:
dla03036
]
I6G47_26575
03400 DNA repair and recombination proteins [BR:
dla03400
]
I6G47_26575
Enzymes [BR:
dla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
I6G47_26575
Transcription machinery [BR:
dla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I6G47_26575
Chromosome and associated proteins [BR:
dla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
I6G47_26575
DNA repair and recombination proteins [BR:
dla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I6G47_26575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
FJX1_middle
HBB
Motif
Other DBs
NCBI-ProteinID:
QPS80508
UniProt:
A0A7T2YSF4
LinkDB
All DBs
Position
5703132..5705486
Genome browser
AA seq
784 aa
AA seq
DB search
MSYTVAVRALCEFTARAGDLDLRFTPAPSALEGMAGHSLVQSRRGKDYETEISLAGEYGD
LRVRGRADGFDAGAGQLEEIKTYRGQIEGVRAHHRALHWAQARIYAHLLCQARGLQRLRV
ALVYFNVGNSEETVLVQEEDAATLRAFFEQQCALFLDWARSEAAHRAAREAALAALRFPM
QGFRAGQRELAVAVYRVARAQQGGQCLMAQAPTGIGKTLGTIFPMLKAMPDQGLDRLFFL
TAKGTGHGLALQALASVNRQIAEQHQPPPQEPAAPQPPPSPPSPPARLRVLAILARDKAC
EHPDKACHGDSCPLARGFFDRLPAARAAALQQAPWDPPAVRAVALAHDICPYYLAQELVR
WSDVVVADYHYFYDSAAMLYALTQAQQWKVGVLVDEAHNLLERARRMYTAELSQFALAAA
RKSATGAVRKALDRLSRSWSALNREQNASYQAHEEVPAGLLGAVQRAVAAIADANADSPM
LPGDPVLDFYWEALQFMALAEQFGGHALFDVHLLPGRSGPRRAPASTLCIRCVVPAPHLA
ARHAAAHASVLFSGTLSPPHFYRDILGLPEGTHWLEADSPFQADQLDVQVAGHISTRYRD
RDRSLRPIADLVAAQYARRPGNYLCFFSSFDYLQRVAECLQRAHPDLPVWLQTPSMDEEG
RAAFLARFTEAGQGVGFAVLGGAFSEGVDLPGERLIGAFVATLGLPQVNPVNEEMKRAMD
RQFGADKGYDYSYLYPGLRKVVQAAGRVIRSERDRGVVFLIDDRYRRGEVQALLPRWWRV
EGMR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacaccgtggccgtgcgcgcgctgtgcgagttcacggcgcgcgcgggcgacctg
gacctgcgcttcacgcccgcgcccagcgcactggagggcatggccggccacagcctggtg
cagtcgcgcaggggcaaggactacgagaccgagatcagcctggccggtgaatacggcgac
ctgcgcgtgcgcggccgcgccgacggcttcgacgccggggctggccagctcgaggaaatc
aagacctaccgcggccagatcgagggcgtgcgcgcccaccaccgcgccctgcactgggcc
caggcgcgcatctacgcccatctgctgtgccaggcgcgcggcctgcagcggctgcgggtg
gccctggtgtatttcaacgtgggcaactcggaggaaaccgtgctggtgcaggaggaagac
gcggccacgctgcgcgccttcttcgagcagcaatgcgcgctgttcctggactgggcgcgc
agcgaggccgcccaccgcgcggcgcgcgaggcggcgctggccgcgctgcgctttcccatg
cagggctttcgcgcgggccagcgcgagctggccgtggccgtctaccgcgtggcgcgcgcg
cagcagggcggccagtgcctgatggcgcaggcgcccacgggcatcggcaagacgctgggt
accatcttccccatgctcaaggccatgccggaccagggcctggacaggctgttcttcctc
acggccaagggcacgggccatggcctggcgctgcaggcgctggccagcgtgaaccggcag
attgccgagcagcaccagccaccgccgcaggaaccggctgcgccacaacctccgccctcg
ccaccctcgccacccgcaaggctgcgcgtgctcgccatcctggcgcgcgacaaggcctgc
gagcatcccgacaaggcctgccacggcgactcctgcccgctggcgcgcggcttcttcgac
cgcctgcccgccgcgcgcgccgccgcgctgcagcaggcgccctgggacccgcctgccgtg
cgtgccgtggcgcttgcgcacgacatctgcccctactacctggcccaggaactggtgcgc
tggagcgacgtggtcgtggccgactaccactacttctacgacagcgccgccatgctgtac
gcgctcacccaggcccagcaatggaaggtgggcgtgctggtggacgaggcccacaacctg
ctcgagcgcgcgcgccgcatgtacacggccgagctgtcgcagttcgccctggcggccgcc
cgcaagtcggccaccggtgccgtgcgcaaggcgctggaccggctcagccgcagctggagc
gcgctgaacagggaacagaacgccagctaccaggcccatgaggaagtgcccgcaggcctg
ctgggcgccgtgcagcgcgccgtggccgccatcgccgacgccaatgccgacagccccatg
ctgcccggcgaccccgtgctggatttttactgggaggcgctgcagttcatggcgctggcc
gagcagttcggcggccatgcgctgttcgatgtccacctgctgcccgggcgctcaggcccc
cgtcgcgcgccggcctccacgctgtgcatacgctgcgtggtgcccgcgccccacctggcg
gcacgccatgcggcggcccatgcctcggtgctgttctcgggcacgctgagcccgccgcac
ttctaccgcgacatcctgggcctgcccgaaggcacgcactggctggaggccgactcgccc
ttccaggccgaccagctcgatgtgcaggtggccggccacatctccacgcgctaccgcgac
cgcgaccgttcgctgcggcccatcgccgatctcgtggccgcgcagtacgcgcgccggccc
ggcaactatctgtgctttttcagcagcttcgactacctgcagcgcgtggccgaatgcctg
cagcgcgcccatcccgatctgccggtctggctgcagaccccgtccatggacgaggagggc
cgcgcggccttcctggcccgcttcaccgaagccgggcagggcgtgggctttgccgtgctg
ggcggggcgttctccgagggcgtggacctgcccggcgagcgcctcatcggcgccttcgtg
gccacgctgggcctgccccaggtcaatcccgtgaacgaagagatgaagcgcgccatggac
cgccagttcggcgcggacaagggctatgactacagctacctctacccggggctgcgcaag
gtggtccaggccgcaggccgcgtcatccgcagcgagcgcgaccgcggcgtggtctttctc
atcgacgaccgctatcggcgcggcgaggtgcaggcgctgctgccgcgctggtggcgggtg
gagggcatgcgatga
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