Delftia lacustris: I6G47_28590
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Entry
I6G47_28590 CDS
T06974
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dla
Delftia lacustris
Pathway
dla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6G47_28590 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dla03400
]
I6G47_28590 (mutM)
Enzymes [BR:
dla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I6G47_28590 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I6G47_28590 (mutM)
DNA repair and recombination proteins [BR:
dla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6G47_28590 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_SprT
PSI_PsaH
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QPS80886
UniProt:
A0A1H3H4K0
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All DBs
Position
6146059..6146886
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AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRAFASQIAGARIESVALGKPLRWPLGIAPELLTGREVHSVRRRGKYLLM
QLSEGLLMLHLGMSGSLRFVAPHELPLGPAGAHDHFDLHTSKGQLRLHDPRRFGAVMYVP
AENDPWARRLLDHLGMEPLDDSFLFETFKAGLKASRTPIKQLLLSGSVVVGVGNIYASEV
LFMARIAPTQPACEVGPRKVRRLFEEIRRVLELAVEQGGTTLRDFSAPDGMAGHFQLQAK
VYGREGQPCTHCGSPIQLLRQGQRSTYFCARCQKA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaagtagaagtcacgcggcgtgcgttcgcctcgcagatcgccgga
gcgcgcattgaatccgtggcgctgggcaagccattgcgctggcctctgggcattgccccc
gagcttctgaccgggcgcgaggtgcacagcgtgcgccggcgcggcaagtacctgctgatg
cagctgagcgaaggcctgctcatgctgcatctgggcatgtcgggcagcctgcgtttcgtg
gcgccgcacgagctgccgctgggtccggcgggcgcgcatgaccatttcgatctgcacacc
agcaagggccagctgcgcctgcacgatccgcgccggttcggtgcggtgatgtatgtgccg
gccgagaacgatccctgggcgcgcaggctgctggaccatctgggaatggagccgctggat
gacagcttcctgttcgagaccttcaaggccggtctgaaggccagccgtacgcccatcaag
caattgctgctgagcggcagcgtggtggtgggcgtgggcaatatctatgcgtccgaagtg
ctgttcatggcacgcattgcgcccacgcagccggcctgcgaggtggggccgcgcaaggtg
cgccggctgttcgaggagattcgccgcgtgctggaactggcggtggagcaagggggcacg
acgctgcgtgatttctcggcgcccgacggcatggcaggccacttccagctgcaggccaag
gtgtatggccgcgagggccagccctgcacgcattgcggctcgcccatacagctgctgcgc
cagggccagcgcagcacctacttttgcgcgcggtgtcagaaagcgtga
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