Delftia lacustris: I6G47_30810
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Entry
I6G47_30810 CDS
T06974
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dla
Delftia lacustris
Pathway
dla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dla00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6G47_30810 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dla03021
]
I6G47_30810 (rpoD)
Transcription machinery [BR:
dla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G47_30810 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QPS81300
UniProt:
A0A1H3G5K5
LinkDB
All DBs
Position
complement(6633453..6635888)
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AA seq
811 aa
AA seq
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MPVSKSVKSKQAPEAPAKPKTSTTSSAPAVKAGAGKAAAGPKSAASAAKAKKDTDVVTKS
QAELKAMADELLAAATPKRGRKKAAEGDDAPAQTEKKPAAAKKAPAKAATSTAAAKTPAK
RGRKPKAKEAGDDMDDADLSDIDGDIDGEVEGEVETEVEVEVEASSAPAEKVKPLRMKIS
KAKERALMKEFGLDETVLTEEEMSTRRQRLKALIKLGKTRGYLTHSEINDHLPDKLVDAE
TLEVVISMLNDMGVAVYEQTPDAETLLLNNTGQSATTEEEAEEEAEAALSTVDSEFGRTT
DPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILAMSEEIREGK
VVISTIVDGFVNANENDDYVAEEDFDEYDEEDDDDGKGGSKALTKKLEELKNEALRRFDA
MRENFDKMHKVYDKEGYGTPTYIKVQKALTEELMTIRFTAKTIEKLCDLVRAQVDDVRKK
ERELRKIIVDKCGMPQETFIAQFPPNLLNLQWVVEQVAAGKPWSSVLERNVPPVQELQQN
LIDLQSRVVVPLDELKRINKRMNDGERASRDAKKEMIEANLRLVISIAKKYTNRGLQFLD
LIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKM
NRISRQHLQEFGFEPDASILAAKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFI
EDTNNTAPVDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVT
RERIRQIEAKALRKLKHPSRSDKLRSFIDSL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttcaaagtccgtgaagtccaagcaggcccccgaagctccagcgaagcccaag
acttcgacaacctcttcagccccggccgtcaaggccggtgccggcaaagccgctgcagga
ccgaagagcgccgcatctgcggccaaagcaaagaaagataccgacgtggtaaccaagtcc
caagccgaactcaaagccatggccgacgaactgctcgccgccgcgacgcccaagcgtggc
cgcaagaaggcagccgaaggcgacgacgcccccgcccagacagaaaagaagcctgctgcc
gccaagaaggcgccggccaaggccgccacctccaccgctgcagccaagacccccgccaag
cgcggccgcaagcccaaggccaaggaagcgggcgacgacatggacgacgccgacctgtcg
gacatcgatggcgacatcgatggcgaagtggaaggcgaagtcgagaccgaagtggaagtc
gaggtcgaggcctcctcggccccggctgaaaaggtcaagcccctgcgcatgaagatcagc
aaggccaaggaacgtgccttgatgaaggaattcggcctggacgaaaccgtcctgaccgaa
gaggaaatgtccacccgccgccagcgcctgaaggcgctgatcaagctgggcaagacgcgc
ggctacctgacgcacagcgaaatcaacgaccacctgcccgacaagctggtcgatgccgag
acgctggaagtcgtgatctccatgctcaacgacatgggcgtggccgtctacgagcagacc
cccgacgcggaaaccctgctgctgaacaacacgggccagtccgccaccaccgaagaggaa
gccgaggaagaggccgaagccgccctgtccacggtggactccgaattcggccgcaccacc
gaccccgtgcgcatgtacatgcgcgaaatgggcacggtggagctgctgacgcgcgaaggc
gagatcgaaatcgccaagcgcatcgaaggcggcctgatggacatgatggaggccatctcg
gcctcgcccgccaccatcgccgaaatcctggccatgtccgaggaaatccgcgaaggcaag
gtcgtcatctccaccatcgtcgacggtttcgtcaacgccaatgagaacgacgactacgtg
gccgaagaagacttcgacgaatacgacgaagaggacgacgacgacggcaagggcggctcc
aaggcactgaccaagaagctcgaagaactcaagaacgaggcgctgcgccgcttcgacgcc
atgcgcgagaacttcgacaagatgcacaaggtgtacgacaaggaaggctacggcacgccc
acgtacatcaaggtgcagaaggccctgaccgaagagctgatgaccatccgcttcacggcc
aagaccatcgagaagctgtgcgacctcgtgcgtgcccaggtcgatgacgtgcgcaagaag
gaacgcgagctgcgcaagatcatcgtggacaagtgcggcatgccgcaggaaaccttcatc
gcccagttcccgcccaacctgctgaacctgcagtgggtggtggagcaggtcgcggcgggc
aagccctggagcagcgtgctggagcgcaatgtcccgcccgtgcaggaactgcagcagaac
ctgatcgacctgcaatcgcgcgtggtcgtgccgctggacgagctcaagcgcatcaacaag
cgcatgaacgacggcgagcgcgccagccgtgacgccaagaaggagatgatcgaggccaac
ctgcgcctggtgatctccatcgccaagaagtacacgaaccgcggcctgcagttcctggac
ctgatccaggaaggcaacatcggcctgatgaaggccgtggacaagttcgaataccgtcgc
ggctacaagttctcgacctatgccacgtggtggatccgccaggccatcacgcgctcgatc
gccgaccaggcgcgcaccatccgcatcccggtgcacatgatcgagaccatcaacaagatg
aaccgcatctcgcgccagcatctgcaggagttcggcttcgagcccgacgcgtccatcctg
gcggccaagatggagatcccggaagacaagatccgcaagatcatgaagatcgccaaggag
ccgatctccatggaaacgccgatcggcgacgacgacgattcgcacctgggcgacttcatc
gaggacaccaacaacaccgctcccgtggacgccgccatgcaggccggcctgcgcgacgtg
gtcaaggacatcctcgacggcctgaccccgcgcgaagccaaggtgctgcgcatgcgcttc
ggcatcgaaatgtccaccgaccacacgctggaagaagtgggcaagcagttcgacgtcacg
cgcgaacgcatccgccagatcgaggctaaggccctgcgcaagctcaagcatccgagccgc
tcggacaagctgcgcagcttcatcgactcgctgtaa
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