Dickeya lacustris: O1Q98_00330
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Entry
O1Q98_00330 CDS
T08984
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
dlc
Dickeya lacustris
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dlc03400
]
O1Q98_00330
DNA repair and recombination proteins [BR:
dlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
O1Q98_00330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
zinc_ribbon_2
SWI2_SNF2
AAA_30
zf-tcix
AAA_22
zf-ribbon_3
DZR
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WFN55821
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Position
complement(71859..73619)
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AA seq
586 aa
AA seq
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MSFTLRPYQQEAVDATLAYFRNHTTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVEQNHAKYCALGGQADIFAAGLKQRDSASKVVFGSVQSVARHLAAFDDAFSLLIIDECH
RISDAEDSQYHLIIRHLQQRQAHLRLLGLTATPYRLGKGWIYRYHYHGMIRGEEHCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLNTQANGLFNETELNRELKRQQRVTPL
IVRQITEYAIHRRGVMIFAATVEHAREITGLLPAGEAALVSADTPAAQRDTLIHAFKQQQ
LRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFTGKTDCLILDYAGNP
FDLYTPEVGEQRPGRDNQPVQVFCPQCGFANQFWGKCTDDGTLIEHYGRRCQGFHEDETG
HRQQCDYRFRFKSCPHCGAENDIAARRCQQCQSILVDPDDMLKAALKLKDARVLRCCGMA
LLAGADAKGEWLKITYHDEDGAEVSERFRLHTPAQRQAFYHLFLRVHQRAPGTPFDWLRA
DDVIAQQARLRAPDFVVARQHGQFWQVREKIFDYQGRYRRAYELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttactctgcgcccctatcagcaagaagcggttgatgccacgctcgcctacttt
cgaaaccacacgacgccagcggtcattgtcttacccaccggtgccggtaaaagcctggtg
atcgccgaactggcgcggctggcacgtggacgcgtgctggtactggcgcatgtaaaagaa
ctggttgaacagaatcatgccaagtattgcgcccttggcgggcaggccgatatttttgcc
gccggtctcaagcagcgcgacagcgccagtaaagtcgtatttggcagcgtgcaatcggtc
gcacgccatctggcggcctttgatgatgcattttcactgttgatcattgatgaatgccat
cgcattagcgacgccgaagacagccaataccacctcatcattcgccacttgcagcagcgt
caagcacatctgcggctgttaggattaaccgccaccccctatcggcttggtaaggggtgg
atttaccgctatcactatcatgggatgatccgaggcgaagagcattgcctgtttcgtgac
tgtatttatgaattaccgttgcgctatatgattcgtcacggctttctggtgccgccggag
cgactggacatgccggtagtgcaatatgactttagtcagctaaacacgcaggctaacggg
ctatttaatgaaaccgagttaaaccgcgaactcaaacgccagcagcgcgtaacgccgctg
attgtgcgccagataaccgaatacgccatccatcgccggggcgtcatgatttttgccgcc
accgtcgaacacgcgcgtgaaattaccggcctgctgcctgcgggagaagctgcccttgtc
agcgccgacacgcccgccgcccagcgagatacgctgattcacgccttcaaacagcaacag
ctgcgctatctggtgaatgtttcggtgctcaccaccggattcgacgccccacatgtcgat
gtcattgcaatattgcgccccaccgagtcggtgagtttgtatcagcaaattatcgggcgc
gggctgcgcctgtttacgggcaaaaccgactgcctgattcttgattatgctggcaacccg
tttgatctctatacgccagaggtcggtgagcaaaggcccgggcgcgataatcaaccggtt
caggtgttttgcccacagtgcgggtttgccaaccaattctggggtaaatgcacggatgac
ggcacgctcattgagcattatgggcggcgctgccagggatttcatgaggatgaaacagga
caccgccagcaatgtgactatcgctttcgctttaaaagctgcccacattgcggtgccgaa
aatgatattgccgcccggcgctgccagcagtgccagagcatcctggttgacccggatgac
atgctaaaagccgcgttaaagctcaaagatgcgcgggtactacgctgttgtggtatggca
ttgctcgccggtgccgatgccaaaggtgaatggcttaaaatcacctatcatgatgaagat
ggtgccgaggtcagcgaacgtttccggctgcatacccccgcgcaacgtcaggcgttttat
cacctgtttttacgcgtacatcagcgcgcgccaggtacgccgttcgactggctacgggcc
gatgatgtgatagcccagcaagctcgcctgagagcgccagacttcgtggtggcacgtcag
cacggccaattttggcaggtgcgcgaaaagattttcgactatcagggccgttatcgccgc
gcctatgaactgcggggttag
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